Parental gene:

GRPEL1, ENSPTRG00000015894

Aliases:None
Description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:H2QP70]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:7218476..7226578(-)


>ENSPTRG00000015894
ATGGCGGCTCAGTGCGTGAGGCTGGCGCGGCGCAGTCTTCCTGCTTTGGCGTTGTCTCTCAGACCATCTCCCCGGTTGTT
GTGCACAGCCACGAAACAAAAGAACAGTGGCCAGAACCTGGAAGAGGACATGGGTCAGAGTGAACAGAAGGCAGATCCTC
CTGCTACAGAGAAGACCCTCCTGGAAGAGAAGGTCAAGTTGGAGGAGCAGCTGAAGGAGACTGTGGAAAAATATAAACGA
GCTTTGGCAGACACTGAGAACTTACGGCAGAGGAGCCAGAAATTGGTGGAGGAGGCAAAATTATACGGCATTCAAGCCTT
CTGCAAGGACTTGTTGGAGGTGGCAGACGTTCTGGAGAAGGCAACACAGTGTGTTCCAAAAGAAGAAATTAAAGACGATA
ACCCTCACCTGAAGAACCTCTATGAGGGGCTGGTCATGACTGAAGTCCAGATCCAGAAGGTGTTCACAAAGCATGGCTTG
CTCAAGTTGAACCCTGTCGGAGCCAAGTTCGACCCTTATGAACATGAGGCCTTGTTCCACACACCGGTTGAGGGGAAGGA
GCCAGGCACAGTGGCCCTAGTTAGCAAAGTGGGGTACAAGCTGCATGGGCGCACTCTGAGACCCGCCCTGGTGGGGGTGG
TGAAGGAAGCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 24 .36 RPM
SRP007412_cerebellum 25 .13 RPM
SRP007412_heart 26 .55 RPM
SRP007412_kidney 42 .71 RPM
SRP007412_liver 53 .55 RPM
SRP007412_testis 38 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014364 ortholog_one2one 1 retrogene
retro_cfam_1776,
Homo sapiens ENSG00000109519 ortholog_one2one 3 retrogenes
retro_hsap_3746, retro_hsap_3864, retro_hsap_3870,
Loxodonta africana ENSLAFG00000002590 ortholog_one2one 1 retrogene
retro_lafr_535,
Monodelphis domestica ENSMODG00000002955 ortholog_one2many 1 retrogene
retro_mdom_28,
Mustela putorius furo ENSMPUG00000010471 ortholog_one2many 1 retrogene
retro_mputfur_32,
Nomascus leucogenys ENSNLEG00000011822 ortholog_one2one 1 retrogene
retro_nleu_2642,
Otolemur garnettii ENSOGAG00000032291 ortholog_one2one 1 retrogene
retro_ogar_1765,
Procavia capensis ENSPCAG00000011314 ortholog_one2one 1 retrogene
retro_pcap_388,
Pongo abelii ENSPPYG00000014573 ortholog_one2one 1 retrogene
retro_pabe_3235,
Pan troglodytes ENSPTRG00000017396 within_species_paralog 2 retrogenes
retro_ptro_3226, retro_ptro_877,
Sarcophilus harrisii ENSSHAG00000007667 ortholog_one2one 1 retrogene
retro_shar_766,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2544 67.50 72.81
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2. retro_ptro_2633 65.89 58.99
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3. retro_ptro_2636 67.36 64.06
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Download FASTA sequences of all ENSPTRG00000015894 retrocopies