Parental gene: | KLF4, ENSPPYG00000019478 |
| Aliases: | None |
| Description: | Kruppel-like factor 4 (gut) [Source:HGNC Symbol;Acc:6348] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:103828209..103833601(-) |
>ENSPPYG00000019478
ATGAGGCAGCCACCTGGCGAGTCTGACATGGCTGTCAGCGACGCGCTGCTCCCATCTTTCTCCACGTTCGCGTCTGGCCC
GGCGGGAAGGGAGAAGACACTGCGTCAAGCAGGTGCCCCGAATAACCGCTGGCGGGAGGAGCTCTCCCACATGAAGCGAC
TTCCTCCGGTGCTTCCCGGCCGCCCCTATGACCTGGCGGCGGCGACCGTGGCCACAGACCTGGAGAGCGGCGGAGCCGGT
GCGGCTTGCGGCGGTAGCAACCTGGTGCCCCTACCTCGGAGAGAGACCGAGGAGTTCAACGATCTCCTGGACCTGGACTT
TATCCTCTCTAATTCGCTGACCCATCCTCCGGAGTCAGTGGCCGCCACCGTGTCCTCGTCAGCGTCAGCCTCCTCCTCGT
CGTCCCCGTCGAGCAGCGGCCCTGCCAGCGCGCCCTCCACCTGCAGCTTCACCTATCCGATCCGGGCCGGGAACGACCCG
GGCGTGGCGCCGGGCGGCACGGGCGGAGGCCTCCTCTATGGCAGGGAGTCCGCTCCCCCTCCGACGGCTCCCTTCAACCT
GGCGGACATCAACGACGTGAGCCCCTCGGGCGGCTTCGTGGCCGAGCTCCTGCGGCCAGAATTGGACCCGGTGTACATTC
CGCCGCAGCAGCCGCAGCCGCCAGGTGGCGGGCTGATGGGCAAGTTCGTACTGAAGGCGTCGCTGAGCGCCCCTGGCAGC
GAGTACGGCAGCCCGTCGGTCATCAGCGTCAGCAAAGGCAGCCCTGACGGCAGCCACCCGGTGGTGGTGGCGCCCTACAA
CGGCGGGCCGCCGCGCACGTGTCCCAAGATCAAGCAGGAGGCGGTCTCCTCGTGCACCCACTTGGGCGCTGGACCCCCTC
TCAGCAATGGCCACCGGCCGGCTGCACACGACTTCCCCCTGGGGCGGCAGCTCCCCAGCAGGACTACCCCGACCCTGGGT
CTTGAGGAAGTGCTGAGCAGCAGGGACTGTCACCCTGCCCTGCCGCTTCCCCCCGGATTCCATCCCCACCCGGGGCCCAA
TTACCCATCCTTCCTGCCCGACCAGATGCAGCCGCAAGTCCCGCCGCTCCACTACCAAGAGCTCATGCCACCCGGTTCGT
GCATGCCGGAGGAGCCCAAGCCAAAGAGGGGAAGACGATCGTGGCCCCGGAAAAGGACCGCCACCCACACTTGTGATTAC
GCGGGCTGCGGCAAAACCTACACAAAGAGTTCCCATCTCAAGGCACACCTGCGAACCCACACAGGTGAGAAACCTTACCA
CTGTGACTGGGACGGCTGTGGATGGAAATTCGCCCGCTCAGATGAACTGACCAGGCACTACCGTAAACACACTGGGCACC
GCCCGTTCCAGTGCCAAAAATGCGACCGAGCATTTTCCAGGTCGGACCACCTTGCCTTACACATGAAGAGGCATTTTTAA
ATGAGGCAGCCACCTGGCGAGTCTGACATGGCTGTCAGCGACGCGCTGCTCCCATCTTTCTCCACGTTCGCGTCTGGCCC
GGCGGGAAGGGAGAAGACACTGCGTCAAGCAGGTGCCCCGAATAACCGCTGGCGGGAGGAGCTCTCCCACATGAAGCGAC
TTCCTCCGGTGCTTCCCGGCCGCCCCTATGACCTGGCGGCGGCGACCGTGGCCACAGACCTGGAGAGCGGCGGAGCCGGT
GCGGCTTGCGGCGGTAGCAACCTGGTGCCCCTACCTCGGAGAGAGACCGAGGAGTTCAACGATCTCCTGGACCTGGACTT
TATCCTCTCTAATTCGCTGACCCATCCTCCGGAGTCAGTGGCCGCCACCGTGTCCTCGTCAGCGTCAGCCTCCTCCTCGT
CGTCCCCGTCGAGCAGCGGCCCTGCCAGCGCGCCCTCCACCTGCAGCTTCACCTATCCGATCCGGGCCGGGAACGACCCG
GGCGTGGCGCCGGGCGGCACGGGCGGAGGCCTCCTCTATGGCAGGGAGTCCGCTCCCCCTCCGACGGCTCCCTTCAACCT
GGCGGACATCAACGACGTGAGCCCCTCGGGCGGCTTCGTGGCCGAGCTCCTGCGGCCAGAATTGGACCCGGTGTACATTC
CGCCGCAGCAGCCGCAGCCGCCAGGTGGCGGGCTGATGGGCAAGTTCGTACTGAAGGCGTCGCTGAGCGCCCCTGGCAGC
GAGTACGGCAGCCCGTCGGTCATCAGCGTCAGCAAAGGCAGCCCTGACGGCAGCCACCCGGTGGTGGTGGCGCCCTACAA
CGGCGGGCCGCCGCGCACGTGTCCCAAGATCAAGCAGGAGGCGGTCTCCTCGTGCACCCACTTGGGCGCTGGACCCCCTC
TCAGCAATGGCCACCGGCCGGCTGCACACGACTTCCCCCTGGGGCGGCAGCTCCCCAGCAGGACTACCCCGACCCTGGGT
CTTGAGGAAGTGCTGAGCAGCAGGGACTGTCACCCTGCCCTGCCGCTTCCCCCCGGATTCCATCCCCACCCGGGGCCCAA
TTACCCATCCTTCCTGCCCGACCAGATGCAGCCGCAAGTCCCGCCGCTCCACTACCAAGAGCTCATGCCACCCGGTTCGT
GCATGCCGGAGGAGCCCAAGCCAAAGAGGGGAAGACGATCGTGGCCCCGGAAAAGGACCGCCACCCACACTTGTGATTAC
GCGGGCTGCGGCAAAACCTACACAAAGAGTTCCCATCTCAAGGCACACCTGCGAACCCACACAGGTGAGAAACCTTACCA
CTGTGACTGGGACGGCTGTGGATGGAAATTCGCCCGCTCAGATGAACTGACCAGGCACTACCGTAAACACACTGGGCACC
GCCCGTTCCAGTGCCAAAAATGCGACCGAGCATTTTCCAGGTCGGACCACCTTGCCTTACACATGAAGAGGCATTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .38 RPM |
| SRP007412_cerebellum | 0 .85 RPM |
| SRP007412_heart | 3 .76 RPM |
| SRP007412_kidney | 1 .96 RPM |
| SRP007412_liver | 1 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020355 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013114 | other_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016299 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022002 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1836 | 94.05 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2020 | 96.12 | 85.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2022 | 97.29 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2024 | 96.10 | 85.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2027 | 96.12 | 85.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2037 | 96.83 | 85.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3579 | 92.23 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000019478 retrocopies