Parental gene: | YY1, ENSPPYG00000025949 |
| Aliases: | None |
| Description: | YY1 transcription factor [Source:HGNC Symbol;Acc:12856] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 14:101780234..101796420(+) |
>ENSPPYG00000025949
TCAGATGAAAAAAAAGATATTGACCATGAGACGGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCTGATTATTC
AGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGGCATTGACCTCTCAGATCCCAAACAACTGGCAGAAT
TTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAG
ATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCACGGTCCCAGAGTCCACGTCTGTGCAGAATGTGGCAA
AGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAG
GCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATGTGCGAATCCATACCGGAGACAGGCCCTATGTGTGC
CCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACATGCTAAGGCCAAAAA
CAACCAG
TCAGATGAAAAAAAAGATATTGACCATGAGACGGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCTGATTATTC
AGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGGCATTGACCTCTCAGATCCCAAACAACTGGCAGAAT
TTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAG
ATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCACGGTCCCAGAGTCCACGTCTGTGCAGAATGTGGCAA
AGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAG
GCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATGTGCGAATCCATACCGGAGACAGGCCCTATGTGTGC
CCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACATGCTAAGGCCAAAAA
CAACCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .79 RPM |
| SRP007412_cerebellum | 19 .09 RPM |
| SRP007412_heart | 5 .72 RPM |
| SRP007412_kidney | 9 .78 RPM |
| SRP007412_liver | 9 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011146 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016853 | ortholog_one2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000005805 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000100811 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026332 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000021264 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000999 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006955 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000006717 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_145 | 76.00 | 92.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_534 | 70.12 | 86.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3616 | 79.29 | 89.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025949 retrocopies