Parental gene:

CCNB1IP1, ENSPTRG00000006088

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:19237509..19258937(-)


>ENSPTRG00000006088
ATGTCTTTGTGTGAAGACATGCTGCTTTGTAATTATCGAAAGTGTCGCATCAAACTCTCTGGCTATGCATGGGTCACTGC
CTGCTCTCACATCTTCTGTGATCAGCATGGCAGTGGTGAGTTTAGTCGCTCACCAGCTATCTGTCCTGCCTGCAACAGTA
CCCTTTCTGGAAAGCTAGATATTGTCCGCACAGAACTCAGTCCATCAGAGGAATATAAAGCTATGGTATTGGCAGGACTG
CGACCAGAGATCGTGTTGGACATTAGCTCCCGAGCACTGGCCTTCTGGACATATCAGGTACATCAGGAACGTCTCTATCA
AGAATACAATTTCAGCAAGGCTGAGGGCCATCTGAAACAGATGGAGAAGATATATACTCAGCAAATACAAAGCAAGGATG
TAGAATTGACCTCAATGAAAGGGGAGGTTACCTCCATGAAGAAAGTACTAGAAGAATACAAGAAAAAGTTCAGTGACATC
TCTGAGAAACTTATGGAGCGCAATCGTCAGTATCAAAAGCTCCAAGGCCTCTATGATAGCCTTAGGCTACGAAACATCAC
TATTGCTAACCATGAAGGCACCCTTGAACCATCCATGATTGCACAGTCTGGTGTTCTTGGCTTCCCATTAGGTAACAACT
CCAAGTTTCCTTTGGATAATACACCTGTTCGAAATCGGGGCGATGGAGATGGAGATTTTCAGTTCAGACCATTTTTTGTG
GGTTCTCCAACAGCACCTGAACCCAGCAACAGCTTTTTTAGTTTTGTCTCTCCAAGTCGTGAATTAGAGCAGCAGCAAGT
TTCTAGCAGGGCCTTCAAAGTAAAAAGAATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .97 RPM
SRP007412_cerebellum 12 .22 RPM
SRP007412_heart 14 .31 RPM
SRP007412_kidney 14 .67 RPM
SRP007412_liver 2 .55 RPM
SRP007412_testis 27 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009967 ortholog_one2one 2 retrogenes
retro_cjac_3244, retro_cjac_4197,
Homo sapiens ENSG00000100814 ortholog_one2one 1 retrogene
retro_hsap_4877,
Gorilla gorilla ENSGGOG00000004586 ortholog_one2one 1 retrogene
retro_ggor_3046,
Microcebus murinus ENSMICG00000000893 ortholog_one2one 2 retrogenes
retro_mmur_1264, retro_mmur_1551,
Macaca mulatta ENSMMUG00000016251 ortholog_one2one 2 retrogenes
retro_mmul_2617, retro_mmul_371,
Nomascus leucogenys ENSNLEG00000010636 ortholog_one2one 1 retrogene
retro_nleu_2556,
Rattus norvegicus ENSRNOG00000026056 ortholog_one2one 1 retrogene
retro_rnor_842,
Ictidomys tridecemlineatus ENSSTOG00000004394 ortholog_one2one 1 retrogene
retro_itri_1590,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3249 73.87 70.76
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Download FASTA sequences of all ENSPTRG00000006088 retrocopies