Parental gene:

GABARAPL2, ENSPTRG00000008362

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:74984867..74996743(+)


>ENSPTRG00000008362
ATGAAGTGGATGTTCAAGGAGGACCACTCGCTGGAACACAGATGCGTGGAGTCCGCGAAGATTCGAGCGAAATATCCCGA
CAGGGTTCCGGTGATTGTGGAAAAGGTCTCAGGCTCTCAGATTGTTGACATTGACAAACGGAAGTACTTGGTTCCATCTG
ATATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCTTCTGAAAAGGCGATCTTCCTGTTTGTG
GATAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTGTATGT
GGCCTACAGCGGAGAGAACACTTTTGGCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 101 .90 RPM
SRP007412_cerebellum 92 .31 RPM
SRP007412_heart 56 .57 RPM
SRP007412_kidney 60 .78 RPM
SRP007412_liver 19 .15 RPM
SRP007412_testis 40 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005453 ortholog_one2one 2 retrogenes
retro_amel_1054, retro_amel_1238,
Callithrix jacchus ENSCJAG00000014253 possible_ortholog 1 retrogene
retro_cjac_146,
Dasypus novemcinctus ENSDNOG00000002240 ortholog_one2one 2 retrogenes
retro_dnov_1755, retro_dnov_2332,
Homo sapiens ENSG00000034713 ortholog_one2one 1 retrogene
retro_hsap_4115,
Gorilla gorilla ENSGGOG00000012299 ortholog_one2one 2 retrogenes
retro_ggor_2761, retro_ggor_342,
Loxodonta africana ENSLAFG00000017065 ortholog_one2one 2 retrogenes
retro_lafr_234, retro_lafr_543,
Myotis lucifugus ENSMLUG00000015112 ortholog_one2one 1 retrogene
retro_mluc_1207,
Macaca mulatta ENSMMUG00000005759 ortholog_one2one 2 retrogenes
retro_mmul_2369, retro_mmul_540,
Nomascus leucogenys ENSNLEG00000013048 ortholog_one2one 2 retrogenes
retro_nleu_1560, retro_nleu_580,
Pongo abelii ENSPPYG00000007565 ortholog_one2one 2 retrogenes
retro_pabe_3368, retro_pabe_372,
Pan troglodytes ENSPTRG00000008445 within_species_paralog 3 retrogenes
retro_ptro_2505, retro_ptro_367, retro_ptro_63,
Pan troglodytes ENSPTRG00000034115 within_species_paralog 1 retrogene
retro_ptro_60,
Rattus norvegicus ENSRNOG00000019425 ortholog_one2one 1 retrogene
retro_rnor_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_250 57.95 71.79
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2. retro_ptro_2794 71.43 100.00
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Download FASTA sequences of all ENSPTRG00000008362 retrocopies