Parental gene:

GABARAPL2, ENSDNOG00000002240

Aliases:None
Description:GABA(A) receptor-associated protein-like 2 [Source:HGNC Symbol;Acc:13291]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_250:1384..10560(+)


>ENSDNOG00000002240
ATGAAGTGGATGTTCAAGGAGGACCATTCGCTGGAACACAGATGCGTGGAATCCGCTAAGATCCGAGCGAAATATCCCGA
CCGGGTTCCGGTGATTGTGGAAAAAGTCTCAGGCTCTCAGATTGTTGACATTGACAAACGGAAGTACCTGGTTCCATCTG
ACATCACTGTGGCTCAATTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCTTCTGAAAAGGCAATCTTCCTGTTTGTG
GATAAGACAGTCCCACAGTCCAGCCTAACCATGGGACAGCTCTATGAGAAGGAAAAGGATGAAGATGGATTCTTGTATGT
GGCCTACAGTGGAGAGAACACTTTTGGCGTCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 35 .39 RPM
SRP012922_cerebellum 99 .80 RPM
SRP012922_heart 48 .96 RPM
SRP012922_kidney 65 .98 RPM
SRP012922_liver 27 .25 RPM
SRP012922_lung 73 .00 RPM
SRP012922_quadricep_muscle 90 .18 RPM
SRP012922_spleen 100 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005453 ortholog_one2one 2 retrogenes
retro_amel_1054, retro_amel_1238,
Canis familiaris ENSCAFG00000031455 ortholog_one2one 1 retrogene
retro_cfam_639,
Callithrix jacchus ENSCJAG00000014253 ortholog_one2many 1 retrogene
retro_cjac_146,
Dasypus novemcinctus ENSDNOG00000010228 within_species_paralog 7 retrogenes
retro_dnov_1008, retro_dnov_1024, retro_dnov_1335, retro_dnov_165, retro_dnov_2435, retro_dnov_2604, retro_dnov_913,
Erinaceus europaeus ENSEEUG00000011134 ortholog_one2one 1 retrogene
retro_eeur_337,
Homo sapiens ENSG00000034713 ortholog_one2one 1 retrogene
retro_hsap_4115,
Gorilla gorilla ENSGGOG00000012299 ortholog_one2one 2 retrogenes
retro_ggor_2761, retro_ggor_342,
Loxodonta africana ENSLAFG00000017065 ortholog_one2one 2 retrogenes
retro_lafr_234, retro_lafr_543,
Microcebus murinus ENSMICG00000011981 ortholog_one2one 1 retrogene
retro_mmur_1473,
Myotis lucifugus ENSMLUG00000015112 ortholog_one2one 1 retrogene
retro_mluc_1207,
Macaca mulatta ENSMMUG00000005759 ortholog_one2one 2 retrogenes
retro_mmul_2369, retro_mmul_540,
Mustela putorius furo ENSMPUG00000009894 ortholog_one2one 1 retrogene
retro_mputfur_993,
Mus musculus ENSMUSG00000031950 ortholog_one2one 5 retrogenes
retro_mmus_2637, retro_mmus_2655, retro_mmus_3240, retro_mmus_456, retro_mmus_506,
Nomascus leucogenys ENSNLEG00000013048 ortholog_one2one 2 retrogenes
retro_nleu_1560, retro_nleu_580,
Pongo abelii ENSPPYG00000007565 ortholog_one2one 2 retrogenes
retro_pabe_3368, retro_pabe_372,
Pan troglodytes ENSPTRG00000008362 ortholog_one2one 2 retrogenes
retro_ptro_250, retro_ptro_2794,
Rattus norvegicus ENSRNOG00000019425 ortholog_one2many 1 retrogene
retro_rnor_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1755 66.10 100.00
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2. retro_dnov_2332 82.50 100.00
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Download FASTA sequences of all ENSDNOG00000002240 retrocopies