Parental gene: | GRPEL2, ENSPTRG00000017396 |
| Aliases: | None |
| Description: | GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:H2QRR7] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:150190203..150199325(+) |
>ENSPTRG00000017396
ATGGCCGTACGGTCGCTGTGGGCGGGCCGGCTGCGGGTGCATCGCCTACTGGCCTGGAGTGCCGCGTGGGAGAGCAAGGG
ATGGCCGCTTCCATTCAGCACTGCCACCCAGAGAACTGCTGGTGAGGACTGCCGTTCTGAGGACCCTCCTGATGAGCTTG
GGCCCCCTCTTGCTGAACGAGCCTTAAGGGTAAAAGCTGTTAAACTGGAGAAAGAAGTCCAAGATTTAACAGTGAGATAC
CAGAGAGCTATAGCTGATTGTGAAAACATAAGGAGGCGAACCCAGAGATGTGTGGAAGACGCCAAGATATTTGGAATCCA
GAGTTTCTGTAAGGACTTGGTGGAGGTGGCTGACATTTTGGAGAAGACTACAGAGTGCATTTCTGAAGAATCGGAGCCTG
AGGACCAAAAGCTCACTCTGGAGAAAGTCTTCCGAGGGTTGTTGCTTTTAGAAGCAAAGCTGAAAAGTGTGTTTGCCAAG
CATGGCCTGGAGAAACTGACACCCATTGGTGACAAATATGACCCCCATGAGCATGAACTCATCTGTCATGTGCCAGCTGG
TGTTGGGGTGCAGCCTGGCACTGTGGCATTAGTAAGACAAGATGGCTACAAACTTCATGGCCGCACCATTAGGCTTGCCC
GAGTGGAAGTGGCAGTGGAGTCTCAGAGAAGACTGTGA
ATGGCCGTACGGTCGCTGTGGGCGGGCCGGCTGCGGGTGCATCGCCTACTGGCCTGGAGTGCCGCGTGGGAGAGCAAGGG
ATGGCCGCTTCCATTCAGCACTGCCACCCAGAGAACTGCTGGTGAGGACTGCCGTTCTGAGGACCCTCCTGATGAGCTTG
GGCCCCCTCTTGCTGAACGAGCCTTAAGGGTAAAAGCTGTTAAACTGGAGAAAGAAGTCCAAGATTTAACAGTGAGATAC
CAGAGAGCTATAGCTGATTGTGAAAACATAAGGAGGCGAACCCAGAGATGTGTGGAAGACGCCAAGATATTTGGAATCCA
GAGTTTCTGTAAGGACTTGGTGGAGGTGGCTGACATTTTGGAGAAGACTACAGAGTGCATTTCTGAAGAATCGGAGCCTG
AGGACCAAAAGCTCACTCTGGAGAAAGTCTTCCGAGGGTTGTTGCTTTTAGAAGCAAAGCTGAAAAGTGTGTTTGCCAAG
CATGGCCTGGAGAAACTGACACCCATTGGTGACAAATATGACCCCCATGAGCATGAACTCATCTGTCATGTGCCAGCTGG
TGTTGGGGTGCAGCCTGGCACTGTGGCATTAGTAAGACAAGATGGCTACAAACTTCATGGCCGCACCATTAGGCTTGCCC
GAGTGGAAGTGGCAGTGGAGTCTCAGAGAAGACTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .46 RPM |
| SRP007412_cerebellum | 17 .28 RPM |
| SRP007412_heart | 9 .56 RPM |
| SRP007412_kidney | 10 .93 RPM |
| SRP007412_liver | 4 .62 RPM |
| SRP007412_testis | 13 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004070 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011142 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003624 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000164284 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005410 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021662 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010160 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016138 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014326 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015933 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000015894 | within_species_paralog | 3 retrogenes | |
| Sorex araneus | ENSSARG00000005467 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_877 | 75.50 | 66.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_3226 | 83.44 | 69.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017396 retrocopies