Parental gene: | SRI, ENSPVAG00000007438 |
| Aliases: | None |
| Description: | sorcin [Source:HGNC Symbol;Acc:11292] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_3857:1270160..1291679(-) |
>ENSPVAG00000007438
TTCTTGATTCTTCTGCTTGGCCACCCTGCAAGGGCACACTCCTCTAAGAATCAACTTCTGCTTCCAAGATCTCACATTAA
GATGCAGTATGGAGGGGCTCCCGGAGGGCCTGCGTTTCCCGGACAAACTCAGGATCCGCTGTATGGTTACTTTGCTGCAG
TAGCTGGACAGGATGGGCAAATAGATGCTGATGAATTGCAGAGATGCCTGACACAGTCGGGCATTGCTGGAGGATACAAA
CCTTTTAACCTGGAGACTTGTCGGCTTATGGTTTCAATGCTGGATAGAGATATGTCAGGCACAATGGGTTTCAGTGAATT
TAAAGAACTCTGGTCTGTACTGAATGGCTGGAGACAGCACTTCATCAGCTTTGACAGCGACAGGAGTGGAACAGTGGATC
CTCAAGAACTTCAGAAGGCCCTGACGACAATGGGATTTCGGTTGAGTCCCCAGGCCGTCAATTCAATTGCAAAACGATAC
AGCACCAATGGAAAGATCACCTTCGATGATTACATAGCCTGTTGTGTCAAACTGCGAGCTCTAACAGACAGTTTTCGAAG
ACGGGATACTGGTCAGCAAGGTGTTGTGAATTTCCCATATGATGATTTCATTCAGTGTGTCATGAGTGTTTAA
TTCTTGATTCTTCTGCTTGGCCACCCTGCAAGGGCACACTCCTCTAAGAATCAACTTCTGCTTCCAAGATCTCACATTAA
GATGCAGTATGGAGGGGCTCCCGGAGGGCCTGCGTTTCCCGGACAAACTCAGGATCCGCTGTATGGTTACTTTGCTGCAG
TAGCTGGACAGGATGGGCAAATAGATGCTGATGAATTGCAGAGATGCCTGACACAGTCGGGCATTGCTGGAGGATACAAA
CCTTTTAACCTGGAGACTTGTCGGCTTATGGTTTCAATGCTGGATAGAGATATGTCAGGCACAATGGGTTTCAGTGAATT
TAAAGAACTCTGGTCTGTACTGAATGGCTGGAGACAGCACTTCATCAGCTTTGACAGCGACAGGAGTGGAACAGTGGATC
CTCAAGAACTTCAGAAGGCCCTGACGACAATGGGATTTCGGTTGAGTCCCCAGGCCGTCAATTCAATTGCAAAACGATAC
AGCACCAATGGAAAGATCACCTTCGATGATTACATAGCCTGTTGTGTCAAACTGCGAGCTCTAACAGACAGTTTTCGAAG
ACGGGATACTGGTCAGCAAGGTGTTGTGAATTTCCCATATGATGATTTCATTCAGTGTGTCATGAGTGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001855 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010096 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000000210 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000027380 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000010355 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000018313 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000049780 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004372 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000004434 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014640 | ortholog_one2many | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000008793 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_734 | 80.70 | 54.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_1112 | 75.14 | 86.19 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000007438 retrocopies