Parental gene: | Erh, ENSRNOG00000004883 |
| Aliases: | None |
| Description: | enhancer of rudimentary homolog [Source:RefSeq peptide;Acc:NP_001102912] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 6:112452338..112461605(-) |
>ENSRNOG00000004883
TGCCTGCGGCAGACAGAAGAGGGCGTCCGATCCCCTGGATTGGAATTACCGGTGATTTCTCACACCATTTTGTTGGTACA
GCCTACCAAGAGGCCAGAAGGCAGGACTTATGCTGACTATGAGTCTGTGAATGAATGCATGGAAGGTGTTTGTAAAATGT
ATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCTTCCATCACATATGATATCAGTCAGTTGTTTGATTTTATTGAC
GATCTGGCAGATCTCAGCTGTCTTGTTTACCGAGCTGATACACAGACATACCAGCCGTATAACAAAGACTGGATCAAAGA
GAAGATCTACGTGCTCCTCCGTCGACAGGCCCAACAGGCTGGGAAGTAA
TGCCTGCGGCAGACAGAAGAGGGCGTCCGATCCCCTGGATTGGAATTACCGGTGATTTCTCACACCATTTTGTTGGTACA
GCCTACCAAGAGGCCAGAAGGCAGGACTTATGCTGACTATGAGTCTGTGAATGAATGCATGGAAGGTGTTTGTAAAATGT
ATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCTTCCATCACATATGATATCAGTCAGTTGTTTGATTTTATTGAC
GATCTGGCAGATCTCAGCTGTCTTGTTTACCGAGCTGATACACAGACATACCAGCCGTATAACAAAGACTGGATCAAAGA
GAAGATCTACGTGCTCCTCCGTCGACAGGCCCAACAGGCTGGGAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .29 RPM |
| SRP017611_kidney | 23 .17 RPM |
| SRP017611_brain | 27 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000014529 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014940 | ortholog_one2many | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000006912 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000019178 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014602 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011879 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021571 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004636 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029388 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_308 | 72.92 | 78.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1721 | 70.73 | 67.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2670 | 61.39 | 81.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000004883 retrocopies