Parental gene: | Csnk1g3, ENSRNOG00000016677 |
| Aliases: | None |
| Description: | Casein kinase I isoform gamma-3 [Source:UniProtKB/Swiss-Prot;Acc:Q62763] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 18:48065994..48126390(+) |
>ENSRNOG00000016677
ATGGATAATAAAAAGAAAGACAAGGACAAATCAGATGACAGAATGGCACGGCCCAGTGGTCGGTCAGGGCACAGCACTCG
AGGAACTGGGTCTTCTTCATCTGGAGTTTTAATGGTTGGACCTAACTTTAGAGTTGGGAAAAAAATTGGATGTGGCAATT
TTGGAGAATTACGATTAGGGAAAAATTTATATACAAATGAATATGTGGCGATTAAACTGGAGCCCATGAAATCCAGAGCA
CCACAGCTGCATTTGGAATACAGATTCTATAAGCAGTTAGGATCTGGAGCTCTTTCAGAAGACAGGTATTCCTGGAACAC
ATGTCTTAAATACAACGCTATGGTGCTGGAACTGCTGGGACCTAGTTTGGAAGATTTGTTTGACCTCTGTGATAGAACAT
TTTCTCTTAAAACCGTTCTCATGATAGCTATACAGCTGATTTCTCGCATGGAGTATGTCCACTCAAAGAACTTGATATAC
AGAGATGTGAAGCCTGAGAATTTCTTAATAGGACGGCCAGGAAACAAAGCCCAGCAAGTCATTCACATCATAGATTTTGG
TTTGGCAAAGGAATATATTGATCCAGAGACAAAGAAACATATACCATACAGAGAACACAAAAGCCTTACTGGAACAGCCA
GATACATGAGCATAAACACACATCTAGGAAAAGAACAGAGCAGAAGAGACGATTTAGAAGCTTTAGGACATATGTTCATG
TATTTCCTGAGAGGCAGTCTTCCTTGGCAAGGCCTAAAGGCAGATACATTAAAAGAGAGATATCAGAAAATTGGAGACAC
AAAACGAGCCACACCGATAGAAGTGCTGTGTGAAAACTTCCCAGAAGAAATGGCAACATATCTTCGTTACGTACGAAGGC
TAGATTTTTTTGAAAAGCCAGACTATGATTACTTAAGAAAGCTTTTTACTGACTTGTTTGATCGCAAAGGGTATATGTTT
GATTATGAATATGACTGGATTGGTAAACAGTTGCCTACTCCTGTAGGTGCAGTTCAGCAAGACCCGGCTCTGTCATCGAA
CAGAGAAGCACACCAACACAGAGACAAGATACAGCAGTCTAAAAACCAGTCGGCAGACCACAGGGCAGCTTGGGACTCCC
AGCAGGCAAATCCCCACCATTTGAGAGCTCACCTTGCAGCAGACAGACATGGTGGCTCGGTACAGGTTGTAAGTTCTACA
AATGGAGAGCTAAACACGGATGACCCCACGGCGGGACGGTCAAATGCACCCATTACAGCCCCTACGGAAGTAGAAGTGAT
GGATGAAACCAAGTGCTGCTGCTTTTTCAAACGAAGGAAAAGGAAAACCATACAACGTCACAAGTGA
ATGGATAATAAAAAGAAAGACAAGGACAAATCAGATGACAGAATGGCACGGCCCAGTGGTCGGTCAGGGCACAGCACTCG
AGGAACTGGGTCTTCTTCATCTGGAGTTTTAATGGTTGGACCTAACTTTAGAGTTGGGAAAAAAATTGGATGTGGCAATT
TTGGAGAATTACGATTAGGGAAAAATTTATATACAAATGAATATGTGGCGATTAAACTGGAGCCCATGAAATCCAGAGCA
CCACAGCTGCATTTGGAATACAGATTCTATAAGCAGTTAGGATCTGGAGCTCTTTCAGAAGACAGGTATTCCTGGAACAC
ATGTCTTAAATACAACGCTATGGTGCTGGAACTGCTGGGACCTAGTTTGGAAGATTTGTTTGACCTCTGTGATAGAACAT
TTTCTCTTAAAACCGTTCTCATGATAGCTATACAGCTGATTTCTCGCATGGAGTATGTCCACTCAAAGAACTTGATATAC
AGAGATGTGAAGCCTGAGAATTTCTTAATAGGACGGCCAGGAAACAAAGCCCAGCAAGTCATTCACATCATAGATTTTGG
TTTGGCAAAGGAATATATTGATCCAGAGACAAAGAAACATATACCATACAGAGAACACAAAAGCCTTACTGGAACAGCCA
GATACATGAGCATAAACACACATCTAGGAAAAGAACAGAGCAGAAGAGACGATTTAGAAGCTTTAGGACATATGTTCATG
TATTTCCTGAGAGGCAGTCTTCCTTGGCAAGGCCTAAAGGCAGATACATTAAAAGAGAGATATCAGAAAATTGGAGACAC
AAAACGAGCCACACCGATAGAAGTGCTGTGTGAAAACTTCCCAGAAGAAATGGCAACATATCTTCGTTACGTACGAAGGC
TAGATTTTTTTGAAAAGCCAGACTATGATTACTTAAGAAAGCTTTTTACTGACTTGTTTGATCGCAAAGGGTATATGTTT
GATTATGAATATGACTGGATTGGTAAACAGTTGCCTACTCCTGTAGGTGCAGTTCAGCAAGACCCGGCTCTGTCATCGAA
CAGAGAAGCACACCAACACAGAGACAAGATACAGCAGTCTAAAAACCAGTCGGCAGACCACAGGGCAGCTTGGGACTCCC
AGCAGGCAAATCCCCACCATTTGAGAGCTCACCTTGCAGCAGACAGACATGGTGGCTCGGTACAGGTTGTAAGTTCTACA
AATGGAGAGCTAAACACGGATGACCCCACGGCGGGACGGTCAAATGCACCCATTACAGCCCCTACGGAAGTAGAAGTGAT
GGATGAAACCAAGTGCTGCTGCTTTTTCAAACGAAGGAAAAGGAAAACCATACAACGTCACAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 18 .29 RPM |
| SRP017611_kidney | 41 .52 RPM |
| SRP017611_brain | 58 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017550 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017348 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000006646 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000073563 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011587 | ortholog_many2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016620 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2189 | 78.42 | 80.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000016677 retrocopies