RetrogeneDB ID: | retro_ogar_246 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873524.1:1308166..1309213(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000024960 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000011587 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.58 % |
Parental protein coverage: | 82.39 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQ |
MKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLM.AIQ | |
Retrocopy | MKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMTAIQ |
Parental | LTEISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTA |
L..ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTA | |
Retrocopy | L--ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTA |
Parental | RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEE |
RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPE. | |
Retrocopy | RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPE- |
Parental | MATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLPTPVGAVQQDPALASNREAHQH |
MATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLPTPVGAVQQ.PALASNREAHQH | |
Retrocopy | MATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLPTPVGAVQQNPALASNREAHQH |
Parental | RDKMQQSKNQVVSSTNGELNTDDPTAGRSNAPITAPTEVEVMDETNCQKVLNMWCCCFFKRRKRKTIQRH |
RDKMQQSKNQVVSSTNGELNTDDPTAGRSNAPITAPTEVEVMDETNCQKVLNMWCCCFFKRRKRKTIQRH | |
Retrocopy | RDKMQQSKNQVVSSTNGELNTDDPTAGRSNAPITAPTEVEVMDETNCQKVLNMWCCCFFKRRKRKTIQRH |
Parental | K |
K | |
Retrocopy | K |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000017550 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000017348 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000006646 | 1 retrocopy | |
Mus musculus | ENSMUSG00000073563 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000003253 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000008746 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000011587 | 1 retrocopy |
retro_ogar_246 ,
|
Otolemur garnettii | ENSOGAG00000014866 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000016063 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000016785 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000016677 | 1 retrocopy |