Parental gene: | Matr3, ENSRNOG00000019875 |
| Aliases: | Matr3, P130/MAT3 |
| Description: | Matrin-3 [Source:UniProtKB/Swiss-Prot;Acc:P43244] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 18:28074391..28103826(+) |
>ENSRNOG00000019875
ATGTCCAAGTCATTCCAGCAGTCATCTCTCGGTAGGGATTCACAGGGTCATGGGCGTGACCTGTCTGCAGCAGGAATAGG
CCTTCTTGCTGCTGCTACCCAGTCTTTAAGTATGCCAGCATCTCTTGGAAGGATGAACCAGGGTACTGCACGCCTTGCTA
GCTTAATGAATCTTGGAATGAGTTCTTCATTGAATCAACAAGGAGCTCATAGTGCACTGTCTTCTGCTAGTACTTCTTCC
CATAATTTGCAGTCTATATTTAACATTGGAAGTAGAGGTCCACTCCCTTTGTCTTCTCAACACCGTGGAGATACAGACCA
GGCCAGTAATATTTTGGCCAGCTTTGGTCTGTCTGCTAGAGACTTAGATGAACTGAGTCGTTATCCAGAGGACAAGATTA
CTCCTGAGAACTTGCCCCAAATTCTTCTACAGCTTAAAAGGAGGAGAACTGAAGAAGGCCCTACATTGAGTTATGGTAGA
GATGGCAGATCTGCTACACGGGAGCCACCATACAGAGTACCTAGGGATGATTGGGAAGAAAAAAGGCATTTTAGAAGAGA
TAGTTTTGATGATCGTGGTCCTAGTCTCAACCCAGTGCTTGATTATGACCATGGAAGTCGTTCTCAAGAATCTGGTTATT
ATGACAGAATGGATTATGAAGATGACAGATTAAGAGATGGAGAAAGGTGTAGGGATGATTCTTTTTTTGGTGAGACCTCG
CATAACTATCATAAATTTGACAGTGAGTATGAGAGAATGGGACGTGGTCCTGGCCCCTTACAAGAGAGATCTCTCTTTGA
GAAAAAGAGGGGCGCTCCTCCAAGTAGCAATATTGAAGACTTCCATGGACTCTTACCGAAGGGTTATCCCCATCTGTGCT
CTATATGTGATTTGCCAGTTCATTCTAATAAGGAGTGGAGTCAACATATCAATGGAGCAAGTCACAGTCGTCGATGCCAG
CTTCTTCTTGAAATCTACCCAGAATGGAATCCTGACAATGATACTGGACACACAATGGGTGATCCATTCATGCTGCAGCA
GTCAACAAACCCAGCACCGGGAATTCTGGGACCGCCACCTCCTTCATTTCATCTTGGAGGACCAGCAGTTGGACCAAGAG
GAAATCTGGGTGCTGGTAATGGGAACCTACAGGGACCAAGACACATGCAAAAAGGCAGAGTGGAAACCAGCCGAGTTGTT
CACATTATGGATTTTCAGCGAGGAAAAAACTTGAGATACCAGCTATTACAACTGGTAGAACCATTTGGAGTCATTTCAAA
TCATCTGATTCTAAATAAAATTAATGAGGCATTTATTGAAATGGCGACCACAGAAGATGCTCAGGCTGCTGTGGATTATT
ATACAACTACACCAGCATTAGTGTTTGGCAAGCCAGTGAGAGTTCATTTATCCCAGAAGTATAAGAGAATAAAGAAACCT
GAAGGAAAACCAGATCAGAAGTTTGATCAAAAGCAAGAACTTGGACGTGTGATACATCTCAGCAATTTACCTCATTCTGG
CTATTCTGACAGTGCTGTCCTCAAGCTTGCAGAGCCTTATGGGAAAATAAAAAATTATATATTGATGAGGATGAAAAGTC
AGGCTTTTATTGAGATGGAAACCAGAGAAGATGCAATGGCAATGGTTGACCACTGTCTAAAGAAGGCACTTTGGTTTCAG
GGAAGATGTGTTAAAGTTGACTTGTCTGAGAAATATAAAAAACTGGTGCTGAGGATTCCTAACAGAGGCATTGACTTACT
GAAAAAAGATAAATCTCGGAAAAGATCCTATTCTCCAGATGGAAAAGAATCTCCAAGTGATAAGAAGTCCAAAACTGATG
GTGCTCAGAAGACTGAGAATCCAGCTGAGGGTAAAGAACAAGAAGAGAAGTCGGGTGAGGATGGTGAGAAAGACACCAAG
GATGACCAGACAGAACAGGAGCCCAGTATGCTTCTTGAATCTGAAGATGAATTGCTTGTCGATGAGGAAGAAGCTGCAGC
ACTACTAGAAAGTGGAAGCTCAGTGGGTGATGAGACTGATCTTGCTAATTTAGGGGATGTATCTTCTGATGGGAAAAAGG
AGCCTTCAGATAAAGCTGTGAAAAAAGATGCAAGTGCAACATCCAAGAAAAAACTTAAAAAGGTGGACAAGATTGAGGAA
CTTGATCAAGAAAATGAAGCTGCATTGGAAAATGGGATTAAAAATGAGGAAAATACAGAACCAGGTGCTGAATCTGCTGA
GAATGCTGATGATCCAAACAAAGACGCAAGTGATAATTCAGATGGCCAAAATGATGAGAACAAGGAGGACTATACAATTC
CAGATGAGTATAGAATTGGACCATATCAGCCTAATGTTCCTGTTGGTATAGACTATGTGATACCTAAAACAGGGTTTTAC
TGTAAGCTGTGTTCACTCTTTTATACAAATGAAGAAGTTGCAAAGAATACTCATTGCAGCAGCCTTCCTCATTATCAGAA
ATTAAAGAAATTTCTGAATAAATTGGCAGAAGAACGGAGGCAGAAGAAGGAAACTTAA
ATGTCCAAGTCATTCCAGCAGTCATCTCTCGGTAGGGATTCACAGGGTCATGGGCGTGACCTGTCTGCAGCAGGAATAGG
CCTTCTTGCTGCTGCTACCCAGTCTTTAAGTATGCCAGCATCTCTTGGAAGGATGAACCAGGGTACTGCACGCCTTGCTA
GCTTAATGAATCTTGGAATGAGTTCTTCATTGAATCAACAAGGAGCTCATAGTGCACTGTCTTCTGCTAGTACTTCTTCC
CATAATTTGCAGTCTATATTTAACATTGGAAGTAGAGGTCCACTCCCTTTGTCTTCTCAACACCGTGGAGATACAGACCA
GGCCAGTAATATTTTGGCCAGCTTTGGTCTGTCTGCTAGAGACTTAGATGAACTGAGTCGTTATCCAGAGGACAAGATTA
CTCCTGAGAACTTGCCCCAAATTCTTCTACAGCTTAAAAGGAGGAGAACTGAAGAAGGCCCTACATTGAGTTATGGTAGA
GATGGCAGATCTGCTACACGGGAGCCACCATACAGAGTACCTAGGGATGATTGGGAAGAAAAAAGGCATTTTAGAAGAGA
TAGTTTTGATGATCGTGGTCCTAGTCTCAACCCAGTGCTTGATTATGACCATGGAAGTCGTTCTCAAGAATCTGGTTATT
ATGACAGAATGGATTATGAAGATGACAGATTAAGAGATGGAGAAAGGTGTAGGGATGATTCTTTTTTTGGTGAGACCTCG
CATAACTATCATAAATTTGACAGTGAGTATGAGAGAATGGGACGTGGTCCTGGCCCCTTACAAGAGAGATCTCTCTTTGA
GAAAAAGAGGGGCGCTCCTCCAAGTAGCAATATTGAAGACTTCCATGGACTCTTACCGAAGGGTTATCCCCATCTGTGCT
CTATATGTGATTTGCCAGTTCATTCTAATAAGGAGTGGAGTCAACATATCAATGGAGCAAGTCACAGTCGTCGATGCCAG
CTTCTTCTTGAAATCTACCCAGAATGGAATCCTGACAATGATACTGGACACACAATGGGTGATCCATTCATGCTGCAGCA
GTCAACAAACCCAGCACCGGGAATTCTGGGACCGCCACCTCCTTCATTTCATCTTGGAGGACCAGCAGTTGGACCAAGAG
GAAATCTGGGTGCTGGTAATGGGAACCTACAGGGACCAAGACACATGCAAAAAGGCAGAGTGGAAACCAGCCGAGTTGTT
CACATTATGGATTTTCAGCGAGGAAAAAACTTGAGATACCAGCTATTACAACTGGTAGAACCATTTGGAGTCATTTCAAA
TCATCTGATTCTAAATAAAATTAATGAGGCATTTATTGAAATGGCGACCACAGAAGATGCTCAGGCTGCTGTGGATTATT
ATACAACTACACCAGCATTAGTGTTTGGCAAGCCAGTGAGAGTTCATTTATCCCAGAAGTATAAGAGAATAAAGAAACCT
GAAGGAAAACCAGATCAGAAGTTTGATCAAAAGCAAGAACTTGGACGTGTGATACATCTCAGCAATTTACCTCATTCTGG
CTATTCTGACAGTGCTGTCCTCAAGCTTGCAGAGCCTTATGGGAAAATAAAAAATTATATATTGATGAGGATGAAAAGTC
AGGCTTTTATTGAGATGGAAACCAGAGAAGATGCAATGGCAATGGTTGACCACTGTCTAAAGAAGGCACTTTGGTTTCAG
GGAAGATGTGTTAAAGTTGACTTGTCTGAGAAATATAAAAAACTGGTGCTGAGGATTCCTAACAGAGGCATTGACTTACT
GAAAAAAGATAAATCTCGGAAAAGATCCTATTCTCCAGATGGAAAAGAATCTCCAAGTGATAAGAAGTCCAAAACTGATG
GTGCTCAGAAGACTGAGAATCCAGCTGAGGGTAAAGAACAAGAAGAGAAGTCGGGTGAGGATGGTGAGAAAGACACCAAG
GATGACCAGACAGAACAGGAGCCCAGTATGCTTCTTGAATCTGAAGATGAATTGCTTGTCGATGAGGAAGAAGCTGCAGC
ACTACTAGAAAGTGGAAGCTCAGTGGGTGATGAGACTGATCTTGCTAATTTAGGGGATGTATCTTCTGATGGGAAAAAGG
AGCCTTCAGATAAAGCTGTGAAAAAAGATGCAAGTGCAACATCCAAGAAAAAACTTAAAAAGGTGGACAAGATTGAGGAA
CTTGATCAAGAAAATGAAGCTGCATTGGAAAATGGGATTAAAAATGAGGAAAATACAGAACCAGGTGCTGAATCTGCTGA
GAATGCTGATGATCCAAACAAAGACGCAAGTGATAATTCAGATGGCCAAAATGATGAGAACAAGGAGGACTATACAATTC
CAGATGAGTATAGAATTGGACCATATCAGCCTAATGTTCCTGTTGGTATAGACTATGTGATACCTAAAACAGGGTTTTAC
TGTAAGCTGTGTTCACTCTTTTATACAAATGAAGAAGTTGCAAAGAATACTCATTGCAGCAGCCTTCCTCATTATCAGAA
ATTAAAGAAATTTCTGAATAAATTGGCAGAAGAACGGAGGCAGAAGAAGGAAACTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .86 RPM |
| SRP017611_kidney | 43 .26 RPM |
| SRP017611_brain | 99 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006888 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000015479 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007308 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009093 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000026311 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010607 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015835 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017294 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_475 | 99.06 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1124 | 99.43 | 62.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000019875 retrocopies