Parental gene: | Csde1, ENSRNOG00000030302 |
| Aliases: | Csde1, Unr |
| Description: | Cold shock domain-containing protein E1 [Source:UniProtKB/Swiss-Prot;Acc:P18395] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:224955791..224983578(+) |
>ENSRNOG00000030302
ATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACACAACGGGTACCCCAATGGTACTTCTGCAGCACTCCGTGAAAC
TGGGGTTATTGAAAAACTGCTGACCTCTTATGGATTTATTCAGTGTTCAGAACGGCAAGCTAGGCTTTTCTTCCACTGTT
CACAGTATAATGGCAACCTCCAGGACTTAAAAGTAGGAGATGATGTGGAATTTGAAGTATCATCTGACCGGAGGACTGGG
AAACCTATTGCTATTAAATTGGTGAAGATAAAACCAGAAATACATCCTGAAGAACGAATGAATGGACAAGTTGTGTGCGC
TGTTCCTCACAACTTAGAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATG
GGGAAGTATTTTATCTGACTTACACCTCTGAAGATGTGGAAGGGAACGTTCAGCTGGAAACTGGAGACAAAATTAACTTT
GTAATTGATAACAATAAACACACTGGTGCTGTAAGTGCTCGTAACATTATGCTGTTGAAAAAGAAACAAGCTCGCTATCA
AGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATTGAAAGAGGTGATGTTGTAAAAGAGATATTCTTTCACTATA
GTGAATTTAAAGGTGATCTAGAAACCCTGCAGCCTGGAGATGACGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAA
GTTGCAACAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAAGGAACTGT
AACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTC
CTAAAGAACTTCCCTTTGGAGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATT
TCAACAGACCGACGTGACAAATTAGAACGAGCAACCAACATAGAGGTTCTATCAAATACATTTCAGTTCACTAATGAAGC
CAGAGAGATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGCTTCATCAAGTGTGTGGACCGTGATGCTCGTATGTTCT
TCCACTTCAGTGAGATTCTCGATGGGAACCAGCTCCACATTGCAGATGAAGTGGAGTTTACTGTGGTCCCTGATATGCTC
TCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAACTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCG
TTTTCTGGGCACCGTAGAAAAAGAAGCCACTTTTTCTAATCCTAAAACTACAAGCCCAAATAAAGGCAAAGACAAGGAGG
CAGAAGATGGCATTATTGCTTATGATGACTGTGGGGTGAAACTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCT
ACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGTGT
GAGACTTTTAGGTCGTAATTCTAATTCCAAAAGGCTCTTGGGTTATGTGGCAACTCTGAAAGATAATTTTGGATTTATTG
AAACAGCTAATCATGATAAGGAGATATTTTTCCATTATAGTGAGTTCTCTGGTGATGTTGATAGCCTGGAACTGGGAGAC
ATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAACTCACTCAGTGAATGG
CATCACTGAGGAAGCAAATCCCACCATCTACTCTGGTAAAGTCATTCGTCCTCTGAGAGGCGTTGATCCAACACAGATTG
AATACCAAGGAATGATTGAGATTGTGGAGGAGGGGGATATGAAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCC
AACAAAGGGGATTGCCTACAGAAAGGGGAGAGTGTTAAGTTCCAGTTGTGTGTACTTGGCCAAAATGCACAAACTATGGC
CTACAACATCACACCCCTTCGTAGGGCTACTGTGGAGTGTGTGAAAGATCAGTTTGGCTTTATTAACTATGAAGTAGGAG
ATAGCAAGAAGCTCTTTTTCCATGTGAAGGAAGTTCAGGATGGCATTGAGCTACAGGCAGGAGATGAGGTGGAATTCTCA
GTGATCCTTAATCAGCGCACTGGGAAATGTAGCGCCTGTAATGTTTGGCGAGTCTGTGAAGGCCCCAAAGCTGTTGCAGC
TCCTCGACCTGATCGGTTGGTTAATCGCTTAAAGAACATCACCCTGGATGATGCCAGTGCTCCACGTCTAATGGTTCTTC
GTCAGCCAAGGGGACCAGATAACTCAATGGGATTTGGTGCAGAAAGAAAGATCCGTCAAGCTGGTGTCATTGACTAA
ATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACACAACGGGTACCCCAATGGTACTTCTGCAGCACTCCGTGAAAC
TGGGGTTATTGAAAAACTGCTGACCTCTTATGGATTTATTCAGTGTTCAGAACGGCAAGCTAGGCTTTTCTTCCACTGTT
CACAGTATAATGGCAACCTCCAGGACTTAAAAGTAGGAGATGATGTGGAATTTGAAGTATCATCTGACCGGAGGACTGGG
AAACCTATTGCTATTAAATTGGTGAAGATAAAACCAGAAATACATCCTGAAGAACGAATGAATGGACAAGTTGTGTGCGC
TGTTCCTCACAACTTAGAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATG
GGGAAGTATTTTATCTGACTTACACCTCTGAAGATGTGGAAGGGAACGTTCAGCTGGAAACTGGAGACAAAATTAACTTT
GTAATTGATAACAATAAACACACTGGTGCTGTAAGTGCTCGTAACATTATGCTGTTGAAAAAGAAACAAGCTCGCTATCA
AGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATTGAAAGAGGTGATGTTGTAAAAGAGATATTCTTTCACTATA
GTGAATTTAAAGGTGATCTAGAAACCCTGCAGCCTGGAGATGACGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAA
GTTGCAACAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAAGGAACTGT
AACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTC
CTAAAGAACTTCCCTTTGGAGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATT
TCAACAGACCGACGTGACAAATTAGAACGAGCAACCAACATAGAGGTTCTATCAAATACATTTCAGTTCACTAATGAAGC
CAGAGAGATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGCTTCATCAAGTGTGTGGACCGTGATGCTCGTATGTTCT
TCCACTTCAGTGAGATTCTCGATGGGAACCAGCTCCACATTGCAGATGAAGTGGAGTTTACTGTGGTCCCTGATATGCTC
TCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAACTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCG
TTTTCTGGGCACCGTAGAAAAAGAAGCCACTTTTTCTAATCCTAAAACTACAAGCCCAAATAAAGGCAAAGACAAGGAGG
CAGAAGATGGCATTATTGCTTATGATGACTGTGGGGTGAAACTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCT
ACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGTGT
GAGACTTTTAGGTCGTAATTCTAATTCCAAAAGGCTCTTGGGTTATGTGGCAACTCTGAAAGATAATTTTGGATTTATTG
AAACAGCTAATCATGATAAGGAGATATTTTTCCATTATAGTGAGTTCTCTGGTGATGTTGATAGCCTGGAACTGGGAGAC
ATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAACTCACTCAGTGAATGG
CATCACTGAGGAAGCAAATCCCACCATCTACTCTGGTAAAGTCATTCGTCCTCTGAGAGGCGTTGATCCAACACAGATTG
AATACCAAGGAATGATTGAGATTGTGGAGGAGGGGGATATGAAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCC
AACAAAGGGGATTGCCTACAGAAAGGGGAGAGTGTTAAGTTCCAGTTGTGTGTACTTGGCCAAAATGCACAAACTATGGC
CTACAACATCACACCCCTTCGTAGGGCTACTGTGGAGTGTGTGAAAGATCAGTTTGGCTTTATTAACTATGAAGTAGGAG
ATAGCAAGAAGCTCTTTTTCCATGTGAAGGAAGTTCAGGATGGCATTGAGCTACAGGCAGGAGATGAGGTGGAATTCTCA
GTGATCCTTAATCAGCGCACTGGGAAATGTAGCGCCTGTAATGTTTGGCGAGTCTGTGAAGGCCCCAAAGCTGTTGCAGC
TCCTCGACCTGATCGGTTGGTTAATCGCTTAAAGAACATCACCCTGGATGATGCCAGTGCTCCACGTCTAATGGTTCTTC
GTCAGCCAAGGGGACCAGATAACTCAATGGGATTTGGTGCAGAAAGAAAGATCCGTCAAGCTGGTGTCATTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 40 .41 RPM |
| SRP017611_kidney | 97 .83 RPM |
| SRP017611_brain | 67 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017129 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000000538 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005681 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000068823 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1429 | 100.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000030302 retrocopies