Parental gene:

ENSSARG00000005720

Aliases:None
Description:None
Organism:Shrew (Sorex araneus)
Coordinates:scaffold_230266:21978..23092(-)


>ENSSARG00000005720
ATGGCCAATGAAAAACCCAAGGGAGGCGTCAAAACTGAGAACAACAATAATATTAATTTGAAGGTAGCAGGTCAGGATGG
TTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTCTTGCGAACGACAGGATTTGT
CAATGAAGCAGATCAGATTCCAACTTGACCGGCAGCCAGTCAACGAAACAGACACACGTGCGCTGTTGGAGATGGAGGAC
GAAGATGCAGTTGATGTGTTCCAGCAGCAGACAGGAGGTGTCGAC

Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000188612 possible_ortholog 2 retrogenes
retro_hsap_4036, retro_hsap_4095,
Gorilla gorilla ENSGGOG00000023769 possible_ortholog 3 retrogenes
retro_ggor_101, retro_ggor_184, retro_ggor_2576,
Loxodonta africana ENSLAFG00000025811 possible_ortholog 10 retrogenes
retro_lafr_104, retro_lafr_1222, retro_lafr_1240, retro_lafr_200, retro_lafr_254, retro_lafr_324, retro_lafr_36, retro_lafr_488, retro_lafr_858, retro_lafr_888,
Monodelphis domestica ENSMODG00000007222 possible_ortholog 11 retrogenes
retro_mdom_1263, retro_mdom_1472, retro_mdom_1474, retro_mdom_1560, retro_mdom_1598, retro_mdom_1755, retro_mdom_237, retro_mdom_378, retro_mdom_517, retro_mdom_788, retro_mdom_986,
Oryctolagus cuniculus ENSOCUG00000028195 possible_ortholog 5 retrogenes
retro_ocun_110, retro_ocun_136, retro_ocun_175, retro_ocun_22, retro_ocun_46,
Pongo abelii ENSPPYG00000029777 possible_ortholog 2 retrogenes
retro_pabe_164, retro_pabe_84,
Sorex araneus ENSSARG00000008205 within_species_paralog 8 retrogenes
retro_sara_130, retro_sara_429, retro_sara_433, retro_sara_456, retro_sara_487, retro_sara_679, retro_sara_758, retro_sara_763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_70 70.00 63.16
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2. retro_sara_93 62.96 54.74
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3. retro_sara_156 67.74 96.84
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4. retro_sara_158 80.85 98.95
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5. retro_sara_175 74.58 61.05
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6. retro_sara_389 81.91 98.95
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7. retro_sara_717 68.57 71.58
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8. retro_sara_749 51.22 84.21
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Download FASTA sequences of all ENSSARG00000005720 retrocopies