RetrogeneDB ID: | retro_sara_93 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_2592:350179..350333(-) | ||
Located in intron of: | ENSSARG00000008093 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005720 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.96 % |
Parental protein coverage: | 54.74 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MANEKPKGGVKT-ENNNNINLKVAGQDGSVVQFKIK-RHTPLSKLMKASCERQD |
.ANEK..G.....ENN..I.LKVAGQDGS.VQFK...R.TPL..LMKAS.ER.D | |
Retrocopy | LANEKTQGSIQM<ENNDHISLKVAGQDGSGVQFKMR<RRTPLGELMKASHERPD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Homo sapiens | ENSG00000188612 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000023769 | 3 retrocopies | |
Loxodonta africana | ENSLAFG00000025811 | 10 retrocopies | |
Monodelphis domestica | ENSMODG00000007222 | 11 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000028195 | 5 retrocopies | |
Pongo abelii | ENSPPYG00000029777 | 2 retrocopies | |
Sorex araneus | ENSSARG00000005720 | 8 retrocopies |
retro_sara_156, retro_sara_158, retro_sara_175, retro_sara_389, retro_sara_70, retro_sara_717, retro_sara_749, retro_sara_93 ,
|
Sorex araneus | ENSSARG00000008205 | 8 retrocopies |