Parental gene:

SUMO2, ENSG00000188612

Aliases:SUMO2, HSMT3, SMT3B, SMT3H2, SUMO3, Smt3A
Description:small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:11125]
Organism:Human (Homo sapiens)
Coordinates:17:73163407..73179078(-)


>ENSG00000188612
ATGGCCGACGAAAAGCCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGGGGCAGGATGG
TTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTATTGTGAACGACAGGGATTGT
CAATGAGGCAGATCAGATTCCGATTTGACGGGCAACCAATCAATGAAACAGACACACCTGCACAGTTGGAAATGGAGGAT
GAAGATACAATTGATGTGTTCCAACAGCAGACGGGAGGTGTCTACTGA

Library Parental gene expression (RPM)
bodymap2_liver 37 .32 RPM
bodymap2_lung 138 .82 RPM
bodymap2_breast 78 .81 RPM
bodymap2_adipose 79 .21 RPM
bodymap2_adrenal 85 .21 RPM
bodymap2_skeletal_muscle 59 .69 RPM
bodymap2_thyroid 78 .38 RPM
bodymap2_prostate 146 .42 RPM
bodymap2_colon 136 .09 RPM
bodymap2_testis 146 .73 RPM
bodymap2_brain 74 .84 RPM
bodymap2_heart 46 .74 RPM
bodymap2_white_blood_cells 129 .90 RPM
bodymap2_lymph_node 125 .67 RPM
bodymap2_ovary 118 .73 RPM
bodymap2_kidney 73 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009189 ortholog_one2one 13 retrogenes
retro_amel_1097, retro_amel_1125, retro_amel_1199, retro_amel_1263, retro_amel_1434, retro_amel_152, retro_amel_1665, retro_amel_276, retro_amel_35, retro_amel_616, retro_amel_653, retro_amel_662, retro_amel_722,
Canis familiaris ENSCAFG00000004724 possible_ortholog 1 retrogene
retro_cfam_484,
Cavia porcellus ENSCPOG00000004581 ortholog_one2one 9 retrogenes
retro_cpor_1029, retro_cpor_1297, retro_cpor_1496, retro_cpor_202, retro_cpor_357, retro_cpor_823, retro_cpor_838, retro_cpor_869, retro_cpor_894,
Homo sapiens ENSG00000116030 within_species_paralog 5 retrogenes
retro_hsap_2007, retro_hsap_240, retro_hsap_2489, retro_hsap_262, retro_hsap_897,
Homo sapiens ENSG00000184900 within_species_paralog 4 retrogenes
retro_hsap_1675, retro_hsap_1841, retro_hsap_3672, retro_hsap_4103,
Gorilla gorilla ENSGGOG00000023769 possible_ortholog 3 retrogenes
retro_ggor_101, retro_ggor_184, retro_ggor_2576,
Loxodonta africana ENSLAFG00000025811 possible_ortholog 10 retrogenes
retro_lafr_104, retro_lafr_1222, retro_lafr_1240, retro_lafr_200, retro_lafr_254, retro_lafr_324, retro_lafr_36, retro_lafr_488, retro_lafr_858, retro_lafr_888,
Monodelphis domestica ENSMODG00000007222 possible_ortholog 11 retrogenes
retro_mdom_1263, retro_mdom_1472, retro_mdom_1474, retro_mdom_1560, retro_mdom_1598, retro_mdom_1755, retro_mdom_237, retro_mdom_378, retro_mdom_517, retro_mdom_788, retro_mdom_986,
Mus musculus ENSMUSG00000020738 possible_ortholog 19 retrogenes
retro_mmus_1498, retro_mmus_1772, retro_mmus_1903, retro_mmus_2050, retro_mmus_2323, retro_mmus_2475, retro_mmus_2492, retro_mmus_2590, retro_mmus_2767, retro_mmus_2917, retro_mmus_2974, retro_mmus_3209, retro_mmus_3414, retro_mmus_3630, retro_mmus_415, retro_mmus_611, retro_mmus_689, retro_mmus_818, retro_mmus_827,
Oryctolagus cuniculus ENSOCUG00000028195 ortholog_one2many 5 retrogenes
retro_ocun_110, retro_ocun_136, retro_ocun_175, retro_ocun_22, retro_ocun_46,
Pongo abelii ENSPPYG00000029777 ortholog_one2one 2 retrogenes
retro_pabe_164, retro_pabe_84,
Pan troglodytes ENSPTRG00000042199 ortholog_one2one 19 retrogenes
retro_ptro_1004, retro_ptro_1183, retro_ptro_1263, retro_ptro_135, retro_ptro_143, retro_ptro_1775, retro_ptro_2051, retro_ptro_2147, retro_ptro_2212, retro_ptro_2247, retro_ptro_2252, retro_ptro_2400, retro_ptro_2463, retro_ptro_2528, retro_ptro_2605, retro_ptro_2666, retro_ptro_2759, retro_ptro_3260, retro_ptro_65,
Sorex araneus ENSSARG00000005720 possible_ortholog 8 retrogenes
retro_sara_156, retro_sara_158, retro_sara_175, retro_sara_389, retro_sara_70, retro_sara_717, retro_sara_749, retro_sara_93,
Sus scrofa ENSSSCG00000017212 ortholog_one2one 15 retrogenes
retro_sscr_1112, retro_sscr_1132, retro_sscr_1147, retro_sscr_1148, retro_sscr_123, retro_sscr_249, retro_sscr_277, retro_sscr_409, retro_sscr_591, retro_sscr_684, retro_sscr_754, retro_sscr_765, retro_sscr_814, retro_sscr_847, retro_sscr_969,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4036 69.35 63.16
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2. retro_hsap_4095 59.68 64.21
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Download FASTA sequences of all ENSG00000188612 retrocopies