Parental gene: | RBBP7, ENSSARG00000008079 |
| Aliases: | None |
| Description: | retinoblastoma binding protein 7 [Source:HGNC Symbol;Acc:9890] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | GeneScaffold_844:160655..191390(-) |
>ENSSARG00000008079
ATGTTTGACAACGCGAGTGCGGCGGATGCCGAGCTCTCTCCGATTGGGGGTTGGAGGGAGCGGGCCGTTGGGTTTCTGCT
GCACGTGGATTCCCCGCCGGGGGTGGGTCGGGGAGCCCTTCTGCTTCCGGGTCGTCATTTTGGAACAGTGTTCGAAGATA
CTGTGGAGGAGCGTGTCATCAATGAAGAATATAAAATCTGGAAGAAGAATACACCGTTTCTGTATGACCTGGTTATGACC
CATGCTCTTCAGTGGCCGAGTCTTACCGTTCAGTGGCTTCCTGAAGTGACTAAACCGGAAGGAAAGGATTATGCCCTTCA
CTGGCTAGTGCTGGGAACCCATACTTCCGATGAGCAGAATCATCTTGTGGTGGCCCGAGTCCATATTCCGAACGATGATG
CGCAGTTTGATGCTTCCCACTGTGAGAGTGACAAGGGGGAATTTGGTGGCTTTGGTTCTGTGACAGGAAAAATTGAATGT
GAAATTAAAATCAACCACGAAGGAGAAGTAAACCGTGCTCGTTACATGCCACAGAACCCTCATATCATTGCGACAAAAAC
CCCATCTTCGGATGTGCTGGTTTTTGATTATACGAAGCATCCTGCTAAACCAGATCCAAGTGGAGAATGCAATCCTGATC
TCCGTCTGAGAGGCCACCAGAAGGAAGGCTATGGCCTTTCCTGGAATTCTAATTTGAGTGGACATCTTCTGAGTGCATCT
GATGACCACACTCGTCTGGATATAAATGCAGGACCAAAGGAAGGCAAAATTGTGGATGCTAAAGGCATCTTCACTGGCCA
CTCTGCTGTGGTGGAGGACGTGGCCTGGCACCTGCTGCACGAGTCCTTGTTTGGATCTGTCGCTGACGATCAGAAACTGA
TGATATGGGACACCAGGTCCAACACCACCTCCAAGCCCAGCCACCTAGTGGATGCGCACACCGCCGAGGTCAATTGCCTG
TCGTTCAATCCCTACAGCGAGTTCATTCTCGCCACTGGCTCTGCAGATAAGACTGTAGCTCTGTGGGATCTGCGCAACTT
AAAATTGAAGCTCCATACCTTTGAGTCTCATAAAGATGAAATCTTCCAGGTCCACTGGTCTCCACATAATGAAACTATTC
TGGCCTCAAGTGGCACCGATCGCCGCCTGAATGTGTGGGATTTAAGCAAAATCGGAGAAGAGCAGTCCGCGGAAGACGCT
GAGGACGGGCCTCCAGAACTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATATTAGCCGGATTCCCTATGA
ATGTGGGATCATTTGCTCTTTGTTTGAGGATATGTTTATCCAGTGGCAGATATCTGACAATATTTACAATGATGAAGATT
CAGATATCACCACAAGAGAAATGTTGCAAAGATCTGAA
ATGTTTGACAACGCGAGTGCGGCGGATGCCGAGCTCTCTCCGATTGGGGGTTGGAGGGAGCGGGCCGTTGGGTTTCTGCT
GCACGTGGATTCCCCGCCGGGGGTGGGTCGGGGAGCCCTTCTGCTTCCGGGTCGTCATTTTGGAACAGTGTTCGAAGATA
CTGTGGAGGAGCGTGTCATCAATGAAGAATATAAAATCTGGAAGAAGAATACACCGTTTCTGTATGACCTGGTTATGACC
CATGCTCTTCAGTGGCCGAGTCTTACCGTTCAGTGGCTTCCTGAAGTGACTAAACCGGAAGGAAAGGATTATGCCCTTCA
CTGGCTAGTGCTGGGAACCCATACTTCCGATGAGCAGAATCATCTTGTGGTGGCCCGAGTCCATATTCCGAACGATGATG
CGCAGTTTGATGCTTCCCACTGTGAGAGTGACAAGGGGGAATTTGGTGGCTTTGGTTCTGTGACAGGAAAAATTGAATGT
GAAATTAAAATCAACCACGAAGGAGAAGTAAACCGTGCTCGTTACATGCCACAGAACCCTCATATCATTGCGACAAAAAC
CCCATCTTCGGATGTGCTGGTTTTTGATTATACGAAGCATCCTGCTAAACCAGATCCAAGTGGAGAATGCAATCCTGATC
TCCGTCTGAGAGGCCACCAGAAGGAAGGCTATGGCCTTTCCTGGAATTCTAATTTGAGTGGACATCTTCTGAGTGCATCT
GATGACCACACTCGTCTGGATATAAATGCAGGACCAAAGGAAGGCAAAATTGTGGATGCTAAAGGCATCTTCACTGGCCA
CTCTGCTGTGGTGGAGGACGTGGCCTGGCACCTGCTGCACGAGTCCTTGTTTGGATCTGTCGCTGACGATCAGAAACTGA
TGATATGGGACACCAGGTCCAACACCACCTCCAAGCCCAGCCACCTAGTGGATGCGCACACCGCCGAGGTCAATTGCCTG
TCGTTCAATCCCTACAGCGAGTTCATTCTCGCCACTGGCTCTGCAGATAAGACTGTAGCTCTGTGGGATCTGCGCAACTT
AAAATTGAAGCTCCATACCTTTGAGTCTCATAAAGATGAAATCTTCCAGGTCCACTGGTCTCCACATAATGAAACTATTC
TGGCCTCAAGTGGCACCGATCGCCGCCTGAATGTGTGGGATTTAAGCAAAATCGGAGAAGAGCAGTCCGCGGAAGACGCT
GAGGACGGGCCTCCAGAACTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATATTAGCCGGATTCCCTATGA
ATGTGGGATCATTTGCTCTTTGTTTGAGGATATGTTTATCCAGTGGCAGATATCTGACAATATTTACAATGATGAAGATT
CAGATATCACCACAAGAGAAATGTTGCAAAGATCTGAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000002820 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000031353 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000683 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014995 | ortholog_one2one | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021702 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005157 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010151 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000002385 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_308 | 87.40 | 55.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sara_571 | 74.65 | 89.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sara_602 | 76.29 | 90.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000008079 retrocopies