Parental gene:

C19orf40, ENSSHAG00000016372

Aliases:None
Description:chromosome 19 open reading frame 40 [Source:HGNC Symbol;Acc:28467]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834643.1:2140118..2155767(-)


>ENSSHAG00000016372
ATGGAGAAAGAAGCCACATTTTCTAGTACAAGCCTTATACACGTTCCATTTGGACATGTTGTTGGATGTGAGAAATGGCG
AGGGTCTCAGTTAGCCCAAGGAATGCAAGGAAAGATTAAGCTCGTCTTTGAGGAAGACCTGACATTAGTAGATTTTCATC
TTTCTAATAGATTCTGTATTCTTTACATTACTGAAGCAGACCTGGTGGCAGGAAATGGGTATAAGAAAAGAATTGTTCGA
CTTAGAAATGCCAGTAATCTTCAAGGGATAATAATAGTTGAAAAAACACAGATGAGTGAACAGTACTTTCCAGCAGTGCA
AAAATTTGTTGTGCTGGAACTTGGAATGGCATTGCTTCCTGTGTCCAGCCAAATGGAAGCATCCCAACTTATTATCCAAC
TGGTCCACGAACAAACCAAAGAGCGCAATAGGAACCCTTTTCTTAGAAAGAAAAACTGCCAGCTCTCTGAATCATCAGTA
CTTCAAACGATAATATCTGGAGCATCTATTAAATTCAAAAAATCATCATCTTGTTCATACTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000728 ortholog_one2one 2 retrogenes
retro_cjac_1011, retro_cjac_3952,
Cavia porcellus ENSCPOG00000011965 ortholog_one2one 1 retrogene
retro_cpor_1536,
Dasypus novemcinctus ENSDNOG00000014134 ortholog_one2one 4 retrogenes
retro_dnov_1817, retro_dnov_2382, retro_dnov_426, retro_dnov_942,
Echinops telfairi ENSETEG00000002716 ortholog_one2one 1 retrogene
retro_etel_458,
Loxodonta africana ENSLAFG00000006401 ortholog_one2one 4 retrogenes
retro_lafr_165, retro_lafr_365, retro_lafr_415, retro_lafr_789,
Myotis lucifugus ENSMLUG00000013287 ortholog_one2one 1 retrogene
retro_mluc_522,
Macaca mulatta ENSMMUG00000017939 ortholog_one2one 1 retrogene
retro_mmul_788,
Procavia capensis ENSPCAG00000009727 ortholog_one2one 1 retrogene
retro_pcap_444,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_299 58.59 53.33
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Download FASTA sequences of all ENSSHAG00000016372 retrocopies