RetrogeneDB ID: | retro_mluc_522 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429767:47309708..47310074(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C19ORF40 | ||
Ensembl ID: | ENSMLUG00000013287 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.44 % |
Parental protein coverage: | 56.74 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | RGSQLAQGMQGKVKLVFEDGLAPVDFYLSVRSCILYITEADLVAGNSYRKRLVRVRNSSNLQGIAIVEKT |
R.S.......GKVKLVFEDGLAPVDFYLSVRSCILYITEADLVAGNSYRKRLVRVRNSSNLQGIAIVEKT | |
Retrocopy | RRSWGVRSQAGKVKLVFEDGLAPVDFYLSVRSCILYITEADLVAGNSYRKRLVRVRNSSNLQGIAIVEKT |
Parental | PTSEQYFPAIQKFTVLDLGMVLLPVASQMEASCIIIQLVQEQTKEPSKNPFL |
PTSEQYFPAIQKFTVLDLGMVLLPVASQMEASCIIIQLVQEQTKEPSKNPFL | |
Retrocopy | PTSEQYFPAIQKFTVLDLGMVLLPVASQMEASCIIIQLVQEQTKEPSKNPFL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000000728 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000011965 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000014134 | 4 retrocopies | |
Echinops telfairi | ENSETEG00000002716 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000006401 | 4 retrocopies | |
Myotis lucifugus | ENSMLUG00000013287 | 1 retrocopy |
retro_mluc_522 ,
|
Macaca mulatta | ENSMMUG00000017939 | 1 retrocopy | |
Procavia capensis | ENSPCAG00000009727 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000016372 | 1 retrocopy |