Parental gene:

CFL2, ENSSSCG00000001959

Aliases:None
Description:Sus scrofa cofilin 2 (muscle) (CFL2), mRNA. [Source:RefSeq mRNA;Acc:NM_001025215]
Organism:Pig (Sus scrofa)
Coordinates:7:69920924..69924154(+)


>ENSSSCG00000001959
ATGGCTTCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATGACATGAAAGTAAGGAAATCTTCTACACAAGA
AGAGATCAAAAAAAGAAAGAAAGCAGTTCTCTTCTGTTTAAGTGATGACAAAAGACAAATAATTGTAGAGGAAGCAAAGC
AGATCTTGGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACATCTTTTGTGAAGTTGCTACCTCTGAATGATTGC
CGATATGCTTTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAAGAAGACCTAGTATTTATATTCTGGGCTCCTGA
AAGTGCACCTTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTATTAAACATG
AGTGGCAAGTAAATGGCTTGGACGATATAAAGGACCGTTCAACACTTGGAGAGAAATTGGGAGGCAACGTAGTCGTTTCA
CTTGAAGGAAAACCCTTATAA

Library Parental gene expression (RPM)
SRP014902_placenta 1 .86 RPM
SRP014902_testis 9 .90 RPM
SRP018288_heart 687 .11 RPM
SRP018288_kidney 50 .43 RPM
SRP018288_liver 34 .54 RPM
SRP018288_lung 52 .13 RPM
SRP018856_adipose 27 .90 RPM
SRP035408_brain 33 .95 RPM
SRP035408_liver 20 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015508 ortholog_one2one 1 retrogene
retro_amel_1347,
Canis familiaris ENSCAFG00000032562 ortholog_one2one 1 retrogene
retro_cfam_1006,
Cavia porcellus ENSCPOG00000008996 ortholog_one2one 1 retrogene
retro_cpor_1003,
Echinops telfairi ENSETEG00000006010 ortholog_one2many 3 retrogenes
retro_etel_1579, retro_etel_1622, retro_etel_684,
Felis catus ENSFCAG00000008480 ortholog_one2one 2 retrogenes
retro_fcat_1223, retro_fcat_1395,
Latimeria chalumnae ENSLACG00000018011 ortholog_one2one 1 retrogene
retro_lcha_23,
Loxodonta africana ENSLAFG00000010579 ortholog_one2one 1 retrogene
retro_lafr_1041,
Macropus eugenii ENSMEUG00000000739 ortholog_one2one 11 retrogenes
retro_meug_1026, retro_meug_1138, retro_meug_125, retro_meug_1266, retro_meug_1666, retro_meug_1791, retro_meug_2025, retro_meug_2062, retro_meug_210, retro_meug_321, retro_meug_668,
Microcebus murinus ENSMICG00000009237 ortholog_one2one 1 retrogene
retro_mmur_493,
Monodelphis domestica ENSMODG00000012949 ortholog_one2many 1 retrogene
retro_mdom_171,
Mus musculus ENSMUSG00000062929 ortholog_one2one 1 retrogene
retro_mmus_660,
Otolemur garnettii ENSOGAG00000032321 ortholog_one2one 1 retrogene
retro_ogar_2346,
Pteropus vampyrus ENSPVAG00000002798 ortholog_one2one 1 retrogene
retro_pvam_398,
Rattus norvegicus ENSRNOG00000045892 ortholog_one2one 1 retrogene
retro_rnor_684,
Sarcophilus harrisii ENSSHAG00000004732 ortholog_one2one 1 retrogene
retro_shar_528,
Sus scrofa ENSSSCG00000007085 within_species_paralog 1 retrogene
retro_sscr_954,
Ictidomys tridecemlineatus ENSSTOG00000001675 ortholog_one2one 3 retrogenes
retro_itri_1313, retro_itri_581, retro_itri_632,
Tupaia belangeri ENSTBEG00000000391 possible_ortholog 2 retrogenes
retro_tbel_29, retro_tbel_4131,
Vicugna pacos ENSVPAG00000003273 ortholog_one2one 1 retrogene
retro_vpac_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_327 72.62 100.00
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2. retro_sscr_1198 61.94 92.77
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Download FASTA sequences of all ENSSSCG00000001959 retrocopies