Parental gene:

DSTN, ENSSSCG00000007085

Aliases:None
Description:Sus scrofa destrin (actin depolymerizing factor) (DSTN), mRNA. [Source:RefSeq mRNA;Acc:NM_001004031]
Organism:Pig (Sus scrofa)
Coordinates:17:29448865..29455861(+)


>ENSSSCG00000007085
GCTTCAGGAGTGCAAGTTGCTGATGAAGTATGTCGCATTTTTTATGACATGAAAGTTCGGAAGTGCTCCACACCAGAAGA
AATCAAGAAAAGAAAGAAGGCTGTCATTTTTTGTCTCAGTGCAGACAAAAAGTGCATCATTGTAGAAGAAGGCAAAGAGA
TCTTAGTTGGAGATGTTGGTGTAACCATAACCGATCCTTTCAAGCATTTCGTGGGGATGCTTCCTGAGAAAGATTGTCGC
TATGCTTTGTATGATGCAAGCTTTGAAACCAAGGAATCCAGAAAAGAGGAGTTGATGTTTTTTCTGTGGGCACCAGAACT
AGCACCTCTGAAAAGTAAAATGATCTATGCCAGCTCCAAGGACGCAATCAAAAAGAAATTTCAAGGCATAAAACATGAAT
GTCAAGCAAATGGGCCAGAAGACCTCAATCGGGCTTGTATTGCTGAAAAGCTAGGTGGATCCTTAATTGTAGCCTTTGAA
GGATGCCCTGTGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 261 .35 RPM
SRP014902_testis 103 .11 RPM
SRP018856_adipose 171 .14 RPM
SRP018288_kidney 514 .49 RPM
SRP018288_lung 265 .36 RPM
SRP018288_liver 88 .27 RPM
SRP018288_heart 221 .07 RPM
SRP035408_liver 127 .64 RPM
SRP035408_brain 313 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003110 ortholog_one2one 5 retrogenes
retro_chof_1308, retro_chof_1656, retro_chof_1758, retro_chof_2297, retro_chof_72,
Cavia porcellus ENSCPOG00000005573 ortholog_one2one 2 retrogenes
retro_cpor_700, retro_cpor_812,
Dasypus novemcinctus ENSDNOG00000000934 ortholog_one2many 1 retrogene
retro_dnov_24,
Erinaceus europaeus ENSEEUG00000011893 ortholog_one2one 1 retrogene
retro_eeur_529,
Homo sapiens ENSG00000125868 ortholog_one2one 1 retrogene
retro_hsap_952,
Gorilla gorilla ENSGGOG00000009007 ortholog_one2many 1 retrogene
retro_ggor_768,
Microcebus murinus ENSMICG00000013687 ortholog_one2one 1 retrogene
retro_mmur_765,
Macaca mulatta ENSMMUG00000013786 ortholog_one2one 1 retrogene
retro_mmul_782,
Mus musculus ENSMUSG00000015932 ortholog_one2one 1 retrogene
retro_mmus_3314,
Nomascus leucogenys ENSNLEG00000009679 ortholog_one2one 1 retrogene
retro_nleu_2458,
Oryctolagus cuniculus ENSOCUG00000027456 ortholog_one2many 1 retrogene
retro_ocun_1891,
Ochotona princeps ENSOPRG00000000976 ortholog_one2one 2 retrogenes
retro_opri_1078, retro_opri_696,
Pongo abelii ENSPPYG00000010727 ortholog_one2one 1 retrogene
retro_pabe_812,
Pan troglodytes ENSPTRG00000013275 ortholog_one2one 1 retrogene
retro_ptro_659,
Pteropus vampyrus ENSPVAG00000000420 ortholog_one2one 1 retrogene
retro_pvam_1275,
Rattus norvegicus ENSRNOG00000005924 ortholog_one2many 1 retrogene
retro_rnor_1710,
Sus scrofa ENSSSCG00000001959 within_species_paralog 2 retrogenes
retro_sscr_1198, retro_sscr_327,
Tupaia belangeri ENSTBEG00000017634 ortholog_one2one 8 retrogenes
retro_tbel_1206, retro_tbel_1977, retro_tbel_2425, retro_tbel_2880, retro_tbel_2881, retro_tbel_4020, retro_tbel_679, retro_tbel_851,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_954 80.00 53.66
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Download FASTA sequences of all ENSSSCG00000007085 retrocopies