Parental gene: | ZDHHC7, ENSSSCG00000002667 |
| Aliases: | None |
| Description: | zinc finger, DHHC-type containing 7 [Source:HGNC Symbol;Acc:18459] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:4215555..4232617(-) |
>ENSSSCG00000002667
ATGCCGTCACCGGGACACCGGCTCCGGGATGTCGAGCACCACCCTCTGCTGAGCGAAAGTGACGCCTACGACTCCGCGCC
GTCCTCGTCCTCCGAGGCCGACGGGGCGGACAGGGTCTGGTTCATCCGCGACGGCTGCGGCGTGGTCTGTGCCGTCCTGA
CGTGGCTCCTGGTGGTGTACGCCGACTTCGTGGTGACCTTCGTCATGCTGCTGCCGTCCAAGGACTTCTGGTACGCCGTG
CTCAACGGCGTCTCCTTCAACTGCCTGGCGGTGCTGGCCCTGTCCTCTCACCTGAGGACCATGCTCACCGACCCCGGGGC
GGTACCCAAAGGAAACGCCACAAAGGAATTCATGGAGAGCTTGCAGCTGAAGCCTGGAGAGGTGATCTACAAGTGCCCCA
AGTGCTGCTGCATCAAGCCCGAGCGTGCCCACCACTGCAGTATTTGCAAAAGATGCATTCGGAAAATGGATCATCACTGC
CCCTGGGTGAACAACTGCGTGGGGGAGAAGAATCAGAGGTTTTTTGTGCTCTTCACTATGTACATCGCTCTGGCCTCGGT
GCACGCGCTCGTCCTCTGCGGGCTCCAGTTCATCTCCTGTGTCCGAGGGCAGTGGACTGAGTGCAGTGGTTTCTCGCCGC
CAGTGACGGTGATCCTGCTCATCTTCCTGTGCCTTGAGGGGCTCCTGTTTTTCACGTTCACCGCCGTCATGTTCGGCACC
CAGATCCACTCCATATGCAACGACGAGACGGAGATCGAGAGGCTCAAGAGTGAGAAGCCCACCTGGGAGCGGAGGCTGCG
GTGGGAGGGGATGAAGTCTGTCTTTGGGGGGCCCCCTTCGCTGCTCTGGATGAACCCCTTCGTTGGCTTCCGACTGCGGC
GCCTGCAGACGAGACCCAGGAAAGGGGGCCCCGAGTTCTCGGTGTGA
ATGCCGTCACCGGGACACCGGCTCCGGGATGTCGAGCACCACCCTCTGCTGAGCGAAAGTGACGCCTACGACTCCGCGCC
GTCCTCGTCCTCCGAGGCCGACGGGGCGGACAGGGTCTGGTTCATCCGCGACGGCTGCGGCGTGGTCTGTGCCGTCCTGA
CGTGGCTCCTGGTGGTGTACGCCGACTTCGTGGTGACCTTCGTCATGCTGCTGCCGTCCAAGGACTTCTGGTACGCCGTG
CTCAACGGCGTCTCCTTCAACTGCCTGGCGGTGCTGGCCCTGTCCTCTCACCTGAGGACCATGCTCACCGACCCCGGGGC
GGTACCCAAAGGAAACGCCACAAAGGAATTCATGGAGAGCTTGCAGCTGAAGCCTGGAGAGGTGATCTACAAGTGCCCCA
AGTGCTGCTGCATCAAGCCCGAGCGTGCCCACCACTGCAGTATTTGCAAAAGATGCATTCGGAAAATGGATCATCACTGC
CCCTGGGTGAACAACTGCGTGGGGGAGAAGAATCAGAGGTTTTTTGTGCTCTTCACTATGTACATCGCTCTGGCCTCGGT
GCACGCGCTCGTCCTCTGCGGGCTCCAGTTCATCTCCTGTGTCCGAGGGCAGTGGACTGAGTGCAGTGGTTTCTCGCCGC
CAGTGACGGTGATCCTGCTCATCTTCCTGTGCCTTGAGGGGCTCCTGTTTTTCACGTTCACCGCCGTCATGTTCGGCACC
CAGATCCACTCCATATGCAACGACGAGACGGAGATCGAGAGGCTCAAGAGTGAGAAGCCCACCTGGGAGCGGAGGCTGCG
GTGGGAGGGGATGAAGTCTGTCTTTGGGGGGCCCCCTTCGCTGCTCTGGATGAACCCCTTCGTTGGCTTCCGACTGCGGC
GCCTGCAGACGAGACCCAGGAAAGGGGGCCCCGAGTTCTCGGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 74 .06 RPM |
| SRP014902_testis | 67 .19 RPM |
| SRP018856_adipose | 56 .58 RPM |
| SRP018288_kidney | 98 .11 RPM |
| SRP018288_lung | 83 .50 RPM |
| SRP018288_liver | 22 .23 RPM |
| SRP018288_heart | 18 .13 RPM |
| SRP035408_liver | 22 .63 RPM |
| SRP035408_brain | 24 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004119 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016077 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011194 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020674 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000005658 | other_paralog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016028 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_267 | 60.87 | 65.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000002667 retrocopies