Parental gene: | BTBD10, ENSSSCG00000013395 |
| Aliases: | None |
| Description: | BTB (POZ) domain containing 10 [Source:HGNC Symbol;Acc:21445] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 2:49163322..49215258(-) |
>ENSSSCG00000013395
ATGCCCAAGGATGCTGACCTGGCTTTCAGTGCTGCATTGTTTGAAAAAGCAGAGTCCCTTTATACTCTGATTTCAAAATT
TTTTTCTTGTTTTTGTGTGTCTACCTTGGCATATACTAAAGTAAGTACTCCCTCACGTGTTGCTAAAGGAGTTGTTGAAC
ACACCAAAATGAGTCTGCATGGTGCTAGTGGGGGACATGAGAGGTCAAGAGATAGACGGAGGTCAAGTGACAGATCACGA
GACTCATCTCATGAAAGAACAGAATCCCAGCTCACTCCTTGTATTAGAAATGTTACTTCTCCAACACGACAGCACCATAT
TGAACGTGAAAAAGATCACAGTTCCTCTCGTCCAAGCAGTCCTCGTCCTCAAAAAGCATCTCCAAATGGTTCCAGCAGCA
GTGCTGGGAACAGCAGCAGAAACAGTAGTCAGTCCAGTTCAGATGGTAACTGTAAGACATCTGGGGAAATGGTGTTTGTT
TATGAAAATGCAAAAGAAGGAGCTCGGAATGTAAGAACATCAGAGCGAGTGACGCTAATAGTGGATAACACTAGATTTGT
TGTGGACCCATCCATTTTTACTGCACAACCAAATACAATGCTGGGCAGGATGTTTGGATCTGGCAGAGAACATAACTTTA
CACGTCCCAATGAGAAGGGAGAGTATGAAGTGGCGGAGGGGATTGGTTCTACTGTGTTTCGAGCTATTCTGGATTACTAT
AAAACAGGAATAATCCGTTGTCCTGATGGCATATCTATTCCCGAACTAAGAGAAGCATGTGACTATCTTTGTATCTCTTT
TGAATATAGTACTATTAAATGTAGAGATCTCAGTGCCCTAATGCATGAGTTATCAAACGATGGTGCTCGTAGACAGTTTG
AATTTTATCTGGAAGAAATGATCCTGCCTCTCATGGTAGCTAGTGCCCAAAGTGGGGAACGTGAATGTCACATAGTGGTG
CTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAAATTATTTATAG
CACAAAATTATATAGATTTTTCAAGTACATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGA
AGATTAGGTTGGGAATAGAAGGTTATCCTACTTACAAAGAAAAAGTAAAGAAAAGGCCTGGGGGCCGCCCAGAAGTGATT
TACAACTATGTCCAAAGACCCTTTATTCGAATGTCTTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTG
TGTAAAGAGTAAATCCATCACCAACCTTGCAGCAGCTGCCGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCACCCAA
CTCCCCAGGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAGCAATGACCTCGATCCTGATGCGCAGAAT
CCAGTGCTGTGA
ATGCCCAAGGATGCTGACCTGGCTTTCAGTGCTGCATTGTTTGAAAAAGCAGAGTCCCTTTATACTCTGATTTCAAAATT
TTTTTCTTGTTTTTGTGTGTCTACCTTGGCATATACTAAAGTAAGTACTCCCTCACGTGTTGCTAAAGGAGTTGTTGAAC
ACACCAAAATGAGTCTGCATGGTGCTAGTGGGGGACATGAGAGGTCAAGAGATAGACGGAGGTCAAGTGACAGATCACGA
GACTCATCTCATGAAAGAACAGAATCCCAGCTCACTCCTTGTATTAGAAATGTTACTTCTCCAACACGACAGCACCATAT
TGAACGTGAAAAAGATCACAGTTCCTCTCGTCCAAGCAGTCCTCGTCCTCAAAAAGCATCTCCAAATGGTTCCAGCAGCA
GTGCTGGGAACAGCAGCAGAAACAGTAGTCAGTCCAGTTCAGATGGTAACTGTAAGACATCTGGGGAAATGGTGTTTGTT
TATGAAAATGCAAAAGAAGGAGCTCGGAATGTAAGAACATCAGAGCGAGTGACGCTAATAGTGGATAACACTAGATTTGT
TGTGGACCCATCCATTTTTACTGCACAACCAAATACAATGCTGGGCAGGATGTTTGGATCTGGCAGAGAACATAACTTTA
CACGTCCCAATGAGAAGGGAGAGTATGAAGTGGCGGAGGGGATTGGTTCTACTGTGTTTCGAGCTATTCTGGATTACTAT
AAAACAGGAATAATCCGTTGTCCTGATGGCATATCTATTCCCGAACTAAGAGAAGCATGTGACTATCTTTGTATCTCTTT
TGAATATAGTACTATTAAATGTAGAGATCTCAGTGCCCTAATGCATGAGTTATCAAACGATGGTGCTCGTAGACAGTTTG
AATTTTATCTGGAAGAAATGATCCTGCCTCTCATGGTAGCTAGTGCCCAAAGTGGGGAACGTGAATGTCACATAGTGGTG
CTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAAATTATTTATAG
CACAAAATTATATAGATTTTTCAAGTACATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGA
AGATTAGGTTGGGAATAGAAGGTTATCCTACTTACAAAGAAAAAGTAAAGAAAAGGCCTGGGGGCCGCCCAGAAGTGATT
TACAACTATGTCCAAAGACCCTTTATTCGAATGTCTTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTG
TGTAAAGAGTAAATCCATCACCAACCTTGCAGCAGCTGCCGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCACCCAA
CTCCCCAGGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAGCAATGACCTCGATCCTGATGCGCAGAAT
CCAGTGCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 9 .03 RPM |
| SRP014902_testis | 17 .82 RPM |
| SRP018856_adipose | 19 .05 RPM |
| SRP018288_kidney | 9 .46 RPM |
| SRP018288_lung | 22 .20 RPM |
| SRP018288_liver | 2 .88 RPM |
| SRP018288_heart | 17 .65 RPM |
| SRP035408_liver | 5 .78 RPM |
| SRP035408_brain | 66 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000024984 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008728 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000038187 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017691 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000739 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003377 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014341 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000000266 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000445 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013943 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_639 | 83.27 | 52.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_640 | 83.27 | 52.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000013395 retrocopies