Parental gene:

BTBD10, ENSTSYG00000000445

Aliases:None
Description:BTB (POZ) domain containing 10 [Source:HGNC Symbol;Acc:21445]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_4796:852..29275(-)


>ENSTSYG00000000445
ATGGCAGGACGCCTTCATCTTTATGACAGTAACTCCAGTGATCCAGAGAATTGGGATCGGAAATTGCATAGTAGACCTCG
TAAACTTTATAAACACTCAAGTACTCCCTCACGTGTTGCTAAAGGAGAAGTTGACCACACCAAAATGAGTCTACATGGTG
CTAGTGGGGGACATGAGAGATCGAGAGATAGACGAAGGTCAAGTGACAGATCACGAGATTCATCTCATGAAAGAACAGAG
TCTCAACTCACGCCTTGCATTAGAAATGTTACTTCTCCAACACGACAGCACCATGTTGAACGAGAAAAAGATCACAGTTC
CTCTCGCCCAAGCAGTCCCCGTCCTCAAAAAGCATCCCCAAATGGTTCCATTAGCAGTGCTGGGAACAGCAGCAGAAACA
GTAGTCAGTCAAGTTCTGATGGTAGTTGTAAGACATCTGGGGAGATGGTGTTTGTATATGAAAATGCAAAGGAAGGTGCT
CGGAATGTAAGAACGTCAGAACGAGTGACACTGATAGTGGATAACACTAGATTTGTTGTAGACCCATCCATTTTTACTGC
ACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCCGAGAACATAACTTTACACGTCCCAATGAGAAGGGAGAAT
ATGAGGTGGCAGAGGGAATTGGTTCCACTGTGTTTCGAGCTATTCTGGATTACTACAAAACGGGAATAATTCGCTGTCCT
GATGGCATATCAATTCCTGAACTGAGAGAAGCATGTGACTATCTTTGTATCTCTTTCGAATATAGTACTATTAAATGTAG
AGATCTCAGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCC
TTCCTCTCATGGTAGCTAGTGCCCAGAGTGGAGAACGAGAATGCCATATAGTGGTGCTTACAGATGATGATGTGGTTGAT
TGGGATGAAGAGTATCCACCACAGATGGGAGAAGAATATTCACAGATTATTTATAGCACAAAATTATATAGATTTTTCAA
GTACATTGAAAACAGAGATGTGGCCAAATCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT
GTTCGAATGTCCTGTGAGAAGGAAGAAGGAATTCAGCATGTATACTTTCCGTGTGTAAAGAATAAATCCATCACTAACCT
CGCCGCTGCGGCAAACATTCCCCAAGACCAGCTGGAGGTCTTGCTCCCAACTCCGGTGGATGAAGGGGATATTCTCCCTA
TCCATCCCCCTTCTGGGAACAGTGACCTCGATCCGGATGCACACAATCCATTGCTGTGA

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000024984 ortholog_one2many 1 retrogene
retro_cpor_137,
Monodelphis domestica ENSMODG00000008728 ortholog_one2one 1 retrogene
retro_mdom_1020,
Mus musculus ENSMUSG00000038187 ortholog_one2one 1 retrogene
retro_mmus_3560,
Nomascus leucogenys ENSNLEG00000017691 ortholog_one2one 1 retrogene
retro_nleu_232,
Otolemur garnettii ENSOGAG00000000739 ortholog_one2one 1 retrogene
retro_ogar_3201,
Pan troglodytes ENSPTRG00000003377 ortholog_one2one 1 retrogene
retro_ptro_753,
Rattus norvegicus ENSRNOG00000014341 ortholog_one2one 2 retrogenes
retro_rnor_2220, retro_rnor_2872,
Sorex araneus ENSSARG00000000266 ortholog_one2one 1 retrogene
retro_sara_405,
Sus scrofa ENSSSCG00000013395 ortholog_one2one 2 retrogenes
retro_sscr_639, retro_sscr_640,
Tarsius syrichta ENSTSYG00000012406 within_species_paralog 1 retrogene
retro_tsyr_2108,
Tursiops truncatus ENSTTRG00000013943 ortholog_one2one 1 retrogene
retro_ttru_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_196 87.88 76.48
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2. retro_tsyr_367 75.63 74.58
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Download FASTA sequences of all ENSTSYG00000000445 retrocopies