Parental gene:

ENSSSCG00000016893

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:16:34963054..34992624(+)


>ENSSSCG00000016893
CTCTCACATTCCTCCAGTATGTATTTTCCAAATATCAAAATAGAAATTTACATGGATATTACCACTTTAACTGGTGTTCC
AGAAGAGCATATCAAAACTAGAAAAGTCAGGATCTTTGTTCCTGCTCGCAATAACATGCAGTCTGGAGTAAACAACACGA
AGAAATGGAAGATGGAGTTCGATACCAGAGAAAGATGGGAAAATCCTCTGATGGGTTGGTCATCAACGGCTGATCCCTTG
TCCAACTTGGTTCTAACTTTCAGCACTAAAGAAGATGCAGTTGCCTTTGCAGAAAAAAATGGATGGAGCTTTGATGTTGA
AGAGAGAAAGGTTCCAAAACCCAAGTCCAAGTCTTATGGTGCAAACTTTTCTTGGAACAAAAGAACAAGAGTATCCACAA
AATAG

Library Parental gene expression (RPM)
SRP014902_placenta 6 .37 RPM
SRP014902_testis 20 .93 RPM
SRP018856_adipose 21 .17 RPM
SRP018288_kidney 51 .62 RPM
SRP018288_lung 6 .72 RPM
SRP018288_liver 32 .46 RPM
SRP018288_heart 104 .41 RPM
SRP035408_liver 68 .75 RPM
SRP035408_brain 62 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000005452 ortholog_one2many 1 retrogene
retro_cpor_1111,
Erinaceus europaeus ENSEEUG00000015851 ortholog_one2many 3 retrogenes
retro_eeur_133, retro_eeur_30, retro_eeur_347,
Macropus eugenii ENSMEUG00000001362 ortholog_one2many 1 retrogene
retro_meug_651,
Microcebus murinus ENSMICG00000015138 possible_ortholog 1 retrogene
retro_mmur_355,
Monodelphis domestica ENSMODG00000019465 ortholog_one2many 1 retrogene
retro_mdom_1227,
Mus musculus ENSMUSG00000021764 ortholog_one2one 1 retrogene
retro_mmus_3372,
Ochotona princeps ENSOPRG00000013784 ortholog_one2one 1 retrogene
retro_opri_508,
Procavia capensis ENSPCAG00000013496 ortholog_one2one 1 retrogene
retro_pcap_268,
Pongo abelii ENSPPYG00000015455 possible_ortholog 1 retrogene
retro_pabe_193,
Tupaia belangeri ENSTBEG00000004605 possible_ortholog 1 retrogene
retro_tbel_2068,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_999 67.19 94.03
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Download FASTA sequences of all ENSSSCG00000016893 retrocopies