Parental gene:

ENSSSCG00000025528

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:X:143582550..143583860(+)


>ENSSSCG00000025528
ATGCAGGCGGCGGACGCAGCCGCCGGCGCGAGCGGCGCGGCGGGCGGCTCCGAGGGCCCAGGCCGCAGGGGTGCCCCTGG
CGGCCGGGGCCGCCCCCGCGGCGCGGGCGCTGCTGCCGTAGCCGCCGCGGGCGTTCCGCCTGTGGCGCCGGCCCAGCGCA
CTTCGGAAGAGGGCGGAGACCCCGCGTCCGCAGCCAAAAGGCCACGGAGCCGAGCACACGTCTTCGCCCTAAGCGTGCCG
TTCCCGTCCTCCTGGGAGGCAGAGATCGCCCGCGGCTCGCTGGCCCCAGATGCTGAGCCCCACCGAGGGGCGGTTGGGAA
GGAGCTCACAGTGAGCGGCAGCGACCTGGCCGTCCACTGGAGAGCTGACGATTCCCGCCTCCTCCGAATTTCCATCGTAA
ACTTTCTTGACCAGCTTTCCCTGGTGATTCGGACCATGCAGCGCTTTGGGCCCCCTGTTAGCCGCTAA

Library Parental gene expression (RPM)
SRP014902_placenta 24 .82 RPM
SRP014902_testis 49 .36 RPM
SRP018856_adipose 15 .30 RPM
SRP018288_kidney 12 .61 RPM
SRP018288_lung 7 .54 RPM
SRP018288_liver 8 .16 RPM
SRP018288_heart 7 .07 RPM
SRP035408_liver 8 .25 RPM
SRP035408_brain 11 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000024143 possible_ortholog 1 retrogene
retro_dnov_244,
Dipodomys ordii ENSDORG00000009093 ortholog_one2many 1 retrogene
retro_dord_448,
Homo sapiens ENSG00000196976 ortholog_one2many 1 retrogene
retro_hsap_4244,
Gorilla gorilla ENSGGOG00000013507 ortholog_one2many 1 retrogene
retro_ggor_2845,
Macaca mulatta ENSMMUG00000007739 ortholog_many2many 1 retrogene
retro_mmul_1145,
Mus musculus ENSMUSG00000015289 ortholog_one2many 2 retrogenes
retro_mmus_1411, retro_mmus_1665,
Nomascus leucogenys ENSNLEG00000014285 ortholog_one2many 1 retrogene
retro_nleu_1373,
Ochotona princeps ENSOPRG00000003778 ortholog_one2many 2 retrogenes
retro_opri_196, retro_opri_549,
Pongo abelii ENSPPYG00000020881 ortholog_one2many 1 retrogene
retro_pabe_3394,
Rattus norvegicus ENSRNOG00000037249 ortholog_one2many 1 retrogene
retro_rnor_595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_94 74.66 93.55
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Download FASTA sequences of all ENSSSCG00000025528 retrocopies