Parental gene:

C12orf45, ENSSSCG00000027792

Aliases:None
Description:chromosome 12 open reading frame 45 [Source:HGNC Symbol;Acc:28628]
Organism:Pig (Sus scrofa)
Coordinates:5:82962983..82975482(-)


>ENSSSCG00000027792
ATGGAGGTTCAGTCGGAATCCCAGTCTGGCCCGACCTGTTCGTCGTCCTCCCAGAACCACTCTGGGGTCTCGGTGTCCAA
GGAGCTGCTGACGGCGGGGAGCGGCGACCAAGGAGGTATATGGGACAAGCTGCTCATCAACTCCAAGCCTAATTCCAGAA
AGAATTCCACTCTTCAAACAGTTCGGATAGAGAGGAGTCCCTTATTGGACCGAGTACAGACGTTTCTCCCACAGATGGCT
CAGGCAAATGAACAGCTAAGAAAAGAAATGGCAGCTGCACCACCTGGTTGTTTCAACATTGAAAATATTGATGAGACTCT
CGGAAAAGTTATACAAATGGATGTGGCCTTGTTTGAGATGAATCCATCTGATTCAAAAGAAGAGGACAGTTCAGAGGAGA
ATTTCACAGACAGCTCAGCCTCTGAGGACGAAGATGACAGTACCTCTTCCGAAGGCGAAACCATCGATACATTACTTCCT
CATTCAGAGCTGGGAAAGCAGATAGAGGTTCTGGACAGTCCTGACAGTGAAAAAAAAGAAACAGGGAAATAA

Library Parental gene expression (RPM)
SRP014902_placenta 1 .86 RPM
SRP014902_testis 7 .07 RPM
SRP018288_heart 4 .56 RPM
SRP018288_kidney 5 .81 RPM
SRP018288_liver 10 .87 RPM
SRP018288_lung 3 .46 RPM
SRP018856_adipose 11 .60 RPM
SRP035408_brain 4 .80 RPM
SRP035408_liver 8 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014728 ortholog_one2many 1 retrogene
retro_cjac_333,
Dasypus novemcinctus ENSDNOG00000017235 ortholog_one2one 1 retrogene
retro_dnov_2327,
Homo sapiens ENSG00000151131 ortholog_one2one 1 retrogene
retro_hsap_292,
Gallus gallus ENSGALG00000012694 ortholog_one2one 1 retrogene
retro_ggal_15,
Gorilla gorilla ENSGGOG00000027272 ortholog_one2one 1 retrogene
retro_ggor_331,
Macaca mulatta ENSMMUG00000017133 ortholog_one2one 1 retrogene
retro_mmul_551,
Nomascus leucogenys ENSNLEG00000006584 ortholog_one2one 1 retrogene
retro_nleu_2414,
Pongo abelii ENSPPYG00000004897 ortholog_one2one 1 retrogene
retro_pabe_382,
Pan troglodytes ENSPTRG00000005381 ortholog_one2one 1 retrogene
retro_ptro_240,
Tursiops truncatus ENSTTRG00000005714 ortholog_one2many 1 retrogene
retro_ttru_1381,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_105 61.90 68.31
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2. retro_sscr_153 61.90 68.31
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Download FASTA sequences of all ENSSSCG00000027792 retrocopies