Parental gene: | PDCD2, ENSSTOG00000022768 |
| Aliases: | None |
| Description: | programmed cell death 2 [Source:HGNC Symbol;Acc:8762] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393908.1:39380..44858(+) |
>ENSSTOG00000022768
GTTTTTAGGAATCAGCTACCCAGGAAAAATGAGTTTTACTCCTATGAGCCACCATCCGAGAACCCTTCCCCAGAAACAGA
ATCTGTGTGTCTCCAACTTAAGTCGGGCGCTCATCTCTGCAGGGTTTGTGGCTGTTTAGGCCCTAAAACGTGTTCCAGAT
GCCACCAAGCACACTATTGCAGTAAGGAGCATCAGACGCTAGACTGGAGGTTGGGGCACAAGCAGGCTTGTACCCAAGTG
GATCATTTGGACCATACAGTTCCAGACCACAACTTCCTTTTTCCTGAATTCGAAATTGTCATAGAAACAGAGGAGGAGAT
TGTGCCTGAAGTTGTGGAAAAGGAAGAAGACTTTGAGATCACAGGAAGCATGGATGAAGCTCTTGAGGAAGAACTGGATT
CCATGGCAAAGCATGAATCCAGGGAAGATAACATTTTCCAGAAGTTCAAAGCTCAGATAGCCCTTGAACCAGAGCAGATT
CTCAGATACGGCAGGGGTACTGAGCCCATCTGGATTTCTGGTGAAAACATCCCTCAAGAGGAGGATATTCCCAACTGTCC
CTGTGGTGCCAAGAGAATATTTGAATTCCAGGTCATGCCACAGCTCCTGAACCACCTCAAGGCAGACAGACTGGGCAAGA
GTGTTGATTGGGGCATCCTGGCTGTCTTCACCTGCGCCGAGAACTGTAGCTTGGGCACTGGCTACACAGAAGAATTTGTA
TGGAAGCAGGATGTAACAGATACACCTTAA
GTTTTTAGGAATCAGCTACCCAGGAAAAATGAGTTTTACTCCTATGAGCCACCATCCGAGAACCCTTCCCCAGAAACAGA
ATCTGTGTGTCTCCAACTTAAGTCGGGCGCTCATCTCTGCAGGGTTTGTGGCTGTTTAGGCCCTAAAACGTGTTCCAGAT
GCCACCAAGCACACTATTGCAGTAAGGAGCATCAGACGCTAGACTGGAGGTTGGGGCACAAGCAGGCTTGTACCCAAGTG
GATCATTTGGACCATACAGTTCCAGACCACAACTTCCTTTTTCCTGAATTCGAAATTGTCATAGAAACAGAGGAGGAGAT
TGTGCCTGAAGTTGTGGAAAAGGAAGAAGACTTTGAGATCACAGGAAGCATGGATGAAGCTCTTGAGGAAGAACTGGATT
CCATGGCAAAGCATGAATCCAGGGAAGATAACATTTTCCAGAAGTTCAAAGCTCAGATAGCCCTTGAACCAGAGCAGATT
CTCAGATACGGCAGGGGTACTGAGCCCATCTGGATTTCTGGTGAAAACATCCCTCAAGAGGAGGATATTCCCAACTGTCC
CTGTGGTGCCAAGAGAATATTTGAATTCCAGGTCATGCCACAGCTCCTGAACCACCTCAAGGCAGACAGACTGGGCAAGA
GTGTTGATTGGGGCATCCTGGCTGTCTTCACCTGCGCCGAGAACTGTAGCTTGGGCACTGGCTACACAGAAGAATTTGTA
TGGAAGCAGGATGTAACAGATACACCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020634 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002920 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019916 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017193 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000025312 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1348 | 86.42 | 64.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1635 | 94.58 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000022768 retrocopies