Parental gene: | HNRNPD, ENSTBEG00000002327 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) [Source:HGNC Symbol;Acc:5036] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_5999:25071..39561(-) |
>ENSTBEG00000002327
CATTCAAACTCCTCCCCACGACACACTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAG
CTGGGACACTACAAAGAAAGATCTGAAGGACTACTTTTCCAAATTTGGTGAAGTTGTAGACTGCACTCTGAAGTTAGATC
CTATCACAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAGTCGGAGAGTGTAGATAAGGTCATGGATCAGAAA
GAACCTAAATTGAATGGGAAGGTGATTGATCCTAAAAGGGCTCAAGCAATGAAAACAAAAGAGCCGGTTAAAAAAATTTT
TGTTGGTGGCTTTTCTCCAGACCCACCTCAAGAGAAAATAAGGCAGTACTTTGCTGGTTCTGGTGCGGTGGAATCCATAG
AGCTCATGGACAACAAGACCAATAAGAGGCGTGGGTTCTGCTTTACTTTTAAGGAAGAAGAGCCAGTGAAGAAGATAATG
GAAAAGAAATACCACGTTGGTCTTAGTAGATGTGAAATAAAAGTAGCCATGTCAAAGGAACAGTATCAGCAACAGCAACA
GTGGGGATCTAGAGGAGGATTTGCAGGAAGAGCTCGTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACCAGGGATATA
GTAACTATTGGAATCAAGGCTATGGCAACTATGGATATAACAGCCAAGGTTACGGTGGTTATGGAGGATATGACTACACT
GGTTACAACAACTACTATGGATATGGTGATTATAGCAACCAGCAGAGTGGTTATGGGAAAGTATCCAGGCGAGGTGGTCA
TCAAAATAGCTACAAACCATACTAA
CATTCAAACTCCTCCCCACGACACACTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAG
CTGGGACACTACAAAGAAAGATCTGAAGGACTACTTTTCCAAATTTGGTGAAGTTGTAGACTGCACTCTGAAGTTAGATC
CTATCACAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAGTCGGAGAGTGTAGATAAGGTCATGGATCAGAAA
GAACCTAAATTGAATGGGAAGGTGATTGATCCTAAAAGGGCTCAAGCAATGAAAACAAAAGAGCCGGTTAAAAAAATTTT
TGTTGGTGGCTTTTCTCCAGACCCACCTCAAGAGAAAATAAGGCAGTACTTTGCTGGTTCTGGTGCGGTGGAATCCATAG
AGCTCATGGACAACAAGACCAATAAGAGGCGTGGGTTCTGCTTTACTTTTAAGGAAGAAGAGCCAGTGAAGAAGATAATG
GAAAAGAAATACCACGTTGGTCTTAGTAGATGTGAAATAAAAGTAGCCATGTCAAAGGAACAGTATCAGCAACAGCAACA
GTGGGGATCTAGAGGAGGATTTGCAGGAAGAGCTCGTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACCAGGGATATA
GTAACTATTGGAATCAAGGCTATGGCAACTATGGATATAACAGCCAAGGTTACGGTGGTTATGGAGGATATGACTACACT
GGTTACAACAACTACTATGGATATGGTGATTATAGCAACCAGCAGAGTGGTTATGGGAAAGTATCCAGGCGAGGTGGTCA
TCAAAATAGCTACAAACCATACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015165 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013312 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002817 | within_species_paralog | 7 retrogenes | |
| Tupaia belangeri | ENSTBEG00000008238 | other_paralog | 30 retrogenes |
retro_tbel_1219, retro_tbel_156, retro_tbel_162, retro_tbel_1643, retro_tbel_1830, retro_tbel_1967, retro_tbel_2192, retro_tbel_2195, retro_tbel_2211, retro_tbel_2330, retro_tbel_261, retro_tbel_2666, retro_tbel_2673, retro_tbel_2703, retro_tbel_276, retro_tbel_2774, retro_tbel_2787, retro_tbel_2970, retro_tbel_3473, retro_tbel_3976, retro_tbel_3995, retro_tbel_4266, retro_tbel_4271, retro_tbel_453, retro_tbel_4653, retro_tbel_4729, retro_tbel_692, retro_tbel_70, retro_tbel_79, retro_tbel_839,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_2698 | 80.58 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000002327 retrocopies