Parental gene: | CHMP5, ENSTBEG00000003486 |
| Aliases: | None |
| Description: | charged multivesicular body protein 5 [Source:HGNC Symbol;Acc:26942] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_5743:352741..369999(+) |
>ENSTBEG00000003486
ATGGACCAATTCTTCCGGGAAGCGAAAACCAAGCTTCCGCCGCCCAGCCTGACTGACTGCACGGTGGACAGCAGGGCAGA
ATCCATTGACAAGAAGATTTCTCGATTGGATGCTGAGCTAGTGAAGTATAAAGATCAGATCAAGAAGATGAGAGAGGGTC
CTGCAAAGAACATGGTCAAGCAGAAAGCCTTGCGGGTTTTAAAGCAAAAGCGGATGTATGAGCAGCAACGGGACAATCTC
GCCCAACAGTCATTTAACATGGAACAAGCCAATTATACCATCCAGTCATTGAAGGACACCAAGACCACGGTCGATGCTAT
GAAACTGGGAGTAAAGGAAATGAAAAAGGCATACAAACAAGTGAAAATTGACCAGATTGAGGATTTGCAAGACCAGCTAG
AGGATATGATGGAAGATGCAAATGAAATCCAAGAAGCACTGAGTCGCAGTTATGGCACCCCAGAATTAGATGAAGATGAC
CTAGAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTATTTAGAAGAAGCAGCATCTGC
ACCTGCAATTTCAGAAAGTATTCCCACTGACACAAAAAACAAG
ATGGACCAATTCTTCCGGGAAGCGAAAACCAAGCTTCCGCCGCCCAGCCTGACTGACTGCACGGTGGACAGCAGGGCAGA
ATCCATTGACAAGAAGATTTCTCGATTGGATGCTGAGCTAGTGAAGTATAAAGATCAGATCAAGAAGATGAGAGAGGGTC
CTGCAAAGAACATGGTCAAGCAGAAAGCCTTGCGGGTTTTAAAGCAAAAGCGGATGTATGAGCAGCAACGGGACAATCTC
GCCCAACAGTCATTTAACATGGAACAAGCCAATTATACCATCCAGTCATTGAAGGACACCAAGACCACGGTCGATGCTAT
GAAACTGGGAGTAAAGGAAATGAAAAAGGCATACAAACAAGTGAAAATTGACCAGATTGAGGATTTGCAAGACCAGCTAG
AGGATATGATGGAAGATGCAAATGAAATCCAAGAAGCACTGAGTCGCAGTTATGGCACCCCAGAATTAGATGAAGATGAC
CTAGAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTATTTAGAAGAAGCAGCATCTGC
ACCTGCAATTTCAGAAAGTATTCCCACTGACACAAAAAACAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012672 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000008104 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000003467 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000006280 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000001424 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000086065 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000012113 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011045 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020149 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004012 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028419 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005158 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000774 | ortholog_one2one | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000019137 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000020857 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008672 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000026573 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010575 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1626 | 82.41 | 53.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_1894 | 73.60 | 61.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_2407 | 77.86 | 67.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_3364 | 83.74 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_3494 | 80.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000003486 retrocopies