Parental gene:

ENSTBEG00000016632

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_1670:72355..74918(+)


>ENSTBEG00000016632
ATGCCCAAGAGAAAGGCTGAAGGGGATGCTAAAGGAGATAAAGCCAAGGTGAAGGACGAACCACAGAGAAGATCTGCAAG
GTTGTCTGCAAAACCTGCTCCTCCAAAGCCAGAGCCCAAGCCTAAAAAGGCCCCTGCAAAGAAGGGAGAGAAGGTACCCA
AAGGAAAAAAGGGAAAAGCTGATGCTGGCAAGGATGGGAACAACCCTGCAGAAAACGGAGATGCCAAAACAGACCAGNNN
NNNAAAGCTGAAGGTGCTGGAGATGCCGAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038104 ortholog_one2one 7 retrogenes
retro_btau_1041, retro_btau_1160, retro_btau_1200, retro_btau_1292, retro_btau_1297, retro_btau_1684, retro_btau_482,
Canis familiaris ENSCAFG00000023168 ortholog_one2one 35 retrogenes
retro_cfam_1043, retro_cfam_1188, retro_cfam_1314, retro_cfam_1360, retro_cfam_1519, retro_cfam_1546, retro_cfam_1593, retro_cfam_1606, retro_cfam_1629, retro_cfam_1681, retro_cfam_1708, retro_cfam_1784, retro_cfam_1989, retro_cfam_2060, retro_cfam_2097, retro_cfam_2133, retro_cfam_266, retro_cfam_317, retro_cfam_324, retro_cfam_351, retro_cfam_353, retro_cfam_38, retro_cfam_381, retro_cfam_410, retro_cfam_446, retro_cfam_538, retro_cfam_623, retro_cfam_628, retro_cfam_705, retro_cfam_745, retro_cfam_783, retro_cfam_795, retro_cfam_821, retro_cfam_845, retro_cfam_860,
Echinops telfairi ENSETEG00000013571 ortholog_one2many 33 retrogenes
retro_etel_1035, retro_etel_1097, retro_etel_1210, retro_etel_1253, retro_etel_1282, retro_etel_1298, retro_etel_1314, retro_etel_1346, retro_etel_1398, retro_etel_1582, retro_etel_165, retro_etel_1690, retro_etel_1710, retro_etel_178, retro_etel_1836, retro_etel_1845, retro_etel_1939, retro_etel_1945, retro_etel_1951, retro_etel_1961, retro_etel_2079, retro_etel_253, retro_etel_292, retro_etel_298, retro_etel_446, retro_etel_481, retro_etel_505, retro_etel_511, retro_etel_571, retro_etel_61, retro_etel_768, retro_etel_819, retro_etel_881,
Felis catus ENSFCAG00000012812 possible_ortholog 3 retrogenes
retro_fcat_1842, retro_fcat_4, retro_fcat_530,
Macropus eugenii ENSMEUG00000010966 possible_ortholog 8 retrogenes
retro_meug_1178, retro_meug_126, retro_meug_1859, retro_meug_1910, retro_meug_1997, retro_meug_248, retro_meug_369, retro_meug_76,
Mus musculus ENSMUSG00000003038 possible_ortholog 2 retrogenes
retro_mmus_202, retro_mmus_2582,
Pteropus vampyrus ENSPVAG00000017269 ortholog_one2one 5 retrogenes
retro_pvam_1046, retro_pvam_1059, retro_pvam_1065, retro_pvam_379, retro_pvam_4,
Sorex araneus ENSSARG00000013139 ortholog_one2one 3 retrogenes
retro_sara_12, retro_sara_17, retro_sara_176,
Sus scrofa ENSSSCG00000003555 ortholog_one2one 3 retrogenes
retro_sscr_573, retro_sscr_66, retro_sscr_985,
Tursiops truncatus ENSTTRG00000005681 possible_ortholog 5 retrogenes
retro_ttru_1392, retro_ttru_1443, retro_ttru_3, retro_ttru_345, retro_ttru_788,
Vicugna pacos ENSVPAG00000008076 ortholog_one2one 1 retrogene
retro_vpac_183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_16 88.89 100.00
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2. retro_tbel_21 85.39 98.89
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3. retro_tbel_36 87.72 63.33
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4. retro_tbel_50 71.67 66.67
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5. retro_tbel_62 96.36 61.11
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6. retro_tbel_65 93.33 100.00
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7. retro_tbel_66 87.64 98.89
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8. retro_tbel_309 86.81 100.00
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9. retro_tbel_320 91.21 100.00
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10. retro_tbel_389 86.36 71.11
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11. retro_tbel_417 79.31 63.33
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12. retro_tbel_448 92.96 78.89
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13. retro_tbel_475 84.51 78.89
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14. retro_tbel_538 76.32 84.44
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15. retro_tbel_704 89.06 71.11
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16. retro_tbel_732 92.65 75.56
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17. retro_tbel_757 94.67 83.33
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18. retro_tbel_1351 74.19 68.89
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19. retro_tbel_1844 86.81 100.00
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20. retro_tbel_2219 55.56 68.89
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21. retro_tbel_2498 93.41 100.00
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22. retro_tbel_2670 71.74 98.89
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23. retro_tbel_3050 89.25 100.00
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24. retro_tbel_3101 89.06 71.11
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25. retro_tbel_3112 89.01 100.00
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26. retro_tbel_3121 70.51 86.67
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27. retro_tbel_3149 57.97 75.56
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28. retro_tbel_3413 98.11 58.89
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29. retro_tbel_3462 87.32 78.89
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30. retro_tbel_4058 84.62 100.00
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31. retro_tbel_4469 79.25 58.89
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32. retro_tbel_4615 77.59 63.33
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33. retro_tbel_4644 69.57 75.56
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Download FASTA sequences of all ENSTBEG00000016632 retrocopies