Parental gene:

ONIVA05G02220

Aliases:None
Description:None
Organism:Indian wild rice (Oryza nivara)
Coordinates:5:1612196..1613568(-)


>ONIVA05G02220
ATGGAGATGATGAGGATGGCGATGAGCCCGGCGATGTCGTCGGCGACGGCGGCGGCGGCGGCGAGCGAGGACGAGGGCGA
CCTGAGGAGGGGGCCATGGACGGTGGAGGAGGACATGCTGCTCGTCGACTACATCGCCAACCACGGCGAGGGTCGCTGGA
ACTCGCTTGCTCGCTGTGCAGGGCTGAGGCGCACCGGCAAGAGCTGCCGTCTCCGGTGGCTGAACTACCTCCGCCCCGAC
GTCCGCCGCGGCAACATCACCGCCGACGAGCAGCTCCTCATCCTCGACCTCCACTCTCGCTGGGGCAACCGGTGGTCTAA
GATCGCGCAGTATTTGCCGGGGAGGACTGATAACGAAATAAAGAATTATTGGAGGACCAGAGTGCAAAAGCACGCGAAGC
AGCTGAGGTGCGACGTCAACAGCAAGGAGTTCCGCGACGTCGTCCGCCACGTCTGGATGCCGCGCCTCGTCGAGCGGATC
CAGGCCGACGCCGCCGCCGCCGGCGAAGTTGCGGCACCGGCGCCGGTGTCGGCGGCGGCGACGAGGTCGATGAGCTCGCC
GGCTGGCGCGATGTACCTCCACCACCAGCAGATTCCGCTCGCCGCCGGCGCCATGGTGGTGGCGCCGGCGGTGAGTAGCG
AAGCGTACCACCACCACGGCTGCGGCGGCGGCGGCGACACGAGCTGCAGCGAGCCGAGCCAGGCGGCGGTGACCATGAGC
CCCGACGACGCATCCAGCACGCTCCGGTCGTCGTCGGCGGCGGCGGAGAACGACACGATCCACGGCGACGTGCTTAGCGG
CAGCTGGTCGGAGCTTCTTGCCACCACCACCACCACCATCGCCGCCACCGCCGGCTTGCCGGACTTCGATGAGCTCGGAG
ATTTCGAGGACAACTTATGGAGCCTTGAGGACATTTGGCTGCACCAGCAGTGTTGA

Species Parental gene accession Homology type Retrogenes number
Oryza brachyantha OB05G12230 ortholog_one2one 1 retrogene
retro_obra_10,
Oryza glumaepatula OGLUM05G02350 ortholog_one2one 1 retrogene
retro_oglu_19,
Oryza punctata OPUNC05G02190 ortholog_one2one 1 retrogene
retro_opun_37,
Oryza glaberrima ORGLA05G0022200 ortholog_one2one 1 retrogene
retro_ogla_43,
Oryza rufipogon ORUFI05G02420 ortholog_one2one 1 retrogene
retro_oruf_21,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oniv_30 76.83 52.73
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Download FASTA sequences of all ONIVA05G02220 retrocopies