Parental gene: | ORUFI05G02420 |
| Aliases: | None |
| Description: | None |
| Organism: | Brownbeard rice (Oryza rufipogon) |
| Coordinates: | 5:1712718..1714100(-) |
>ORUFI05G02420
ATGGATTTGGAGATGGAGATGATGAGGATGGCGATGAGCCCGGCGATGTCGTCGGCGACGGCGGCGGCGGCGAGCGAGGA
CGAGGGCGACCTGAGGAGGGGGCCATGGACGGTGGAGGAGGACATGCTGCTCGTCGACTACATCGCCAACCACGGCGAGG
GTCGCTGGAACTCGCTTGCTCGCTGTGCAGGGCTGAGGCGCACCGGCAAGAGCTGCCGTCTCCGGTGGCTGAACTACCTC
CGCCCCGACGTCCGCCGCGGCAACATCACCGCCGACGAGCAGCTCCTCATCCTCGACCTCCACTCTCGCTGGGGCAACCG
GTGGTCTAAGATCGCGCAGTATTTGCCGGGGAGGACTGATAACGAAATAAAGAATTATTGGAGGACCAGAGTGCAAAAGC
ACGCGAAGCAGCTGAGGTGCGACGTCAACAGCAAGGAGTTCCGCGACGTCGTCCGCCACGTCTGGATGCCGCGCCTCGTC
GAGCGGATCCAGGCCGACGCCGCCGCCGCCGGCGAAGTTGCGGCACCGGCGCCGGTGTCGGCGGCGGCGACGAGGTCGAT
GAGCTCGCCGGCTGGCGCGATATACCTCCACCACCAGCAGATTCCGCTCGCCGCCGGCGCCATGGTGGTGGCGCCGGCGG
TGAGTAGCGAAGCGTACCACCACCACGGCTGCGGCGGCGGCGGCGACACGAGCTGCAGCGAGCCGAGCCAGGCGGCGGTG
ACCATGAGCCCCGACGACGCATCCAGCACGCTCCGGTCGTCGTCGGCGGCGGCGGAGAACGACACGATCCACGGCGACGT
GCTTAGCGGCAGCTGGTCGGAGCTTCTTGCCACCACCACCACCACCATCGCCGCCACCGCCGGCTTGCCGGACTTCGATG
AGCTCGGAGATTTCGAGGACAACTTATGGAGCCTTGAGGACATTTGGCTGCACCAGCAGTGTTGA
ATGGATTTGGAGATGGAGATGATGAGGATGGCGATGAGCCCGGCGATGTCGTCGGCGACGGCGGCGGCGGCGAGCGAGGA
CGAGGGCGACCTGAGGAGGGGGCCATGGACGGTGGAGGAGGACATGCTGCTCGTCGACTACATCGCCAACCACGGCGAGG
GTCGCTGGAACTCGCTTGCTCGCTGTGCAGGGCTGAGGCGCACCGGCAAGAGCTGCCGTCTCCGGTGGCTGAACTACCTC
CGCCCCGACGTCCGCCGCGGCAACATCACCGCCGACGAGCAGCTCCTCATCCTCGACCTCCACTCTCGCTGGGGCAACCG
GTGGTCTAAGATCGCGCAGTATTTGCCGGGGAGGACTGATAACGAAATAAAGAATTATTGGAGGACCAGAGTGCAAAAGC
ACGCGAAGCAGCTGAGGTGCGACGTCAACAGCAAGGAGTTCCGCGACGTCGTCCGCCACGTCTGGATGCCGCGCCTCGTC
GAGCGGATCCAGGCCGACGCCGCCGCCGCCGGCGAAGTTGCGGCACCGGCGCCGGTGTCGGCGGCGGCGACGAGGTCGAT
GAGCTCGCCGGCTGGCGCGATATACCTCCACCACCAGCAGATTCCGCTCGCCGCCGGCGCCATGGTGGTGGCGCCGGCGG
TGAGTAGCGAAGCGTACCACCACCACGGCTGCGGCGGCGGCGGCGACACGAGCTGCAGCGAGCCGAGCCAGGCGGCGGTG
ACCATGAGCCCCGACGACGCATCCAGCACGCTCCGGTCGTCGTCGGCGGCGGCGGAGAACGACACGATCCACGGCGACGT
GCTTAGCGGCAGCTGGTCGGAGCTTCTTGCCACCACCACCACCACCATCGCCGCCACCGCCGGCTTGCCGGACTTCGATG
AGCTCGGAGATTTCGAGGACAACTTATGGAGCCTTGAGGACATTTGGCTGCACCAGCAGTGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza brachyantha | OB05G12230 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G02350 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA05G02220 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC05G02190 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA05G0022200 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oruf_21 | 74.12 | 54.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORUFI05G02420 retrocopies