Parental gene: | ORGLA05G0022200 |
| Aliases: | None |
| Description: | None |
| Organism: | African rice (Oryza glaberrima) |
| Coordinates: | 5:1612720..1614140(-) |
>ORGLA05G0022200
ATGGAGATGATGGGGATGGCGATGAGCCCGGCGATGTCGTCGGCGACAGCGGCGGCGGCGAGCGAGGACGAGGGCGACCT
GAGGAGGGGGCCATGGACGGTGGAGGAGGACATGCTGCTCGTCGACTACATCGCCAACCACGGCGAGGGTCGCTGGAACT
CGCTTGCTCGCTGTGCAGGGCTGAGGCGCACCGGCAAGAGCTGCCGTCTCCGGTGGCTGAACTACCTCCGCCCCGACGTC
CGCCGCGGCAACATCACCGCCGACGAGCAGCTCCTCATCCTCGACCTCCACTCTCGCTGGGGCAACCGGTGGTCTAAGAT
CGCGCAGTATTTGCCGGGGAGGACTGATAACGAAATAAAGAATTATTGGAGGACCAGAGTGCAAAAGCACGCGAAGCAAC
TGAGGTGCGACGTCAACAGCAAGGAGTTCCGCGACGTCGTCCGCCACGTCTGGATGCCGCGCCTCGTCGAGCGCATCCAG
GCCGACGCCGCCGCCGCCGGCGAAGTGGCGGCGCCGGCGCCGGTGTCGGCGGCGGCGACGAGGTCGATGAGCTCGCCGGC
TGGCGCGATGTACCTCCACCACCAGCAGATTCCGCTCGCCGCCGGCGCCATGGTGGTGGCGCCGGCGGCGAGTAGCGAAG
CGTACCACCACCACGGCGGCGGCGACACGAGCTGCAGCGAGCCGAGCCAGGCGGCGGTGACCATGAGCCCCGACGACGCA
TCCAGCACGCTCCGGTCGTCGGCCGCGGCCGCTGCGGCGGAGGACGAAGTGATCCACGGCGACGTGCTTAGCGGCAGCTG
GTCGGAGCTTCTTGCCACCACCACCACCACCATCGCCGCCACCGGCGGCCGCGACGGCGCCGCCACCGCCGGCTTGCCGG
ACTTCGATGAGCTCGGAGATTTCGAGGACAACTTATGGAGCCTTGAGGACATTTGGCTGCACCAGCAGTGTTGA
ATGGAGATGATGGGGATGGCGATGAGCCCGGCGATGTCGTCGGCGACAGCGGCGGCGGCGAGCGAGGACGAGGGCGACCT
GAGGAGGGGGCCATGGACGGTGGAGGAGGACATGCTGCTCGTCGACTACATCGCCAACCACGGCGAGGGTCGCTGGAACT
CGCTTGCTCGCTGTGCAGGGCTGAGGCGCACCGGCAAGAGCTGCCGTCTCCGGTGGCTGAACTACCTCCGCCCCGACGTC
CGCCGCGGCAACATCACCGCCGACGAGCAGCTCCTCATCCTCGACCTCCACTCTCGCTGGGGCAACCGGTGGTCTAAGAT
CGCGCAGTATTTGCCGGGGAGGACTGATAACGAAATAAAGAATTATTGGAGGACCAGAGTGCAAAAGCACGCGAAGCAAC
TGAGGTGCGACGTCAACAGCAAGGAGTTCCGCGACGTCGTCCGCCACGTCTGGATGCCGCGCCTCGTCGAGCGCATCCAG
GCCGACGCCGCCGCCGCCGGCGAAGTGGCGGCGCCGGCGCCGGTGTCGGCGGCGGCGACGAGGTCGATGAGCTCGCCGGC
TGGCGCGATGTACCTCCACCACCAGCAGATTCCGCTCGCCGCCGGCGCCATGGTGGTGGCGCCGGCGGCGAGTAGCGAAG
CGTACCACCACCACGGCGGCGGCGACACGAGCTGCAGCGAGCCGAGCCAGGCGGCGGTGACCATGAGCCCCGACGACGCA
TCCAGCACGCTCCGGTCGTCGGCCGCGGCCGCTGCGGCGGAGGACGAAGTGATCCACGGCGACGTGCTTAGCGGCAGCTG
GTCGGAGCTTCTTGCCACCACCACCACCACCATCGCCGCCACCGGCGGCCGCGACGGCGCCGCCACCGCCGGCTTGCCGG
ACTTCGATGAGCTCGGAGATTTCGAGGACAACTTATGGAGCCTTGAGGACATTTGGCTGCACCAGCAGTGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza brachyantha | OB05G12230 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G02350 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA05G02220 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC05G02190 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI05G02420 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogla_43 | 72.99 | 54.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORGLA05G0022200 retrocopies