RetrogeneDB ID: | retro_amel_1712 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194060.1:63729..64056(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000003712 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000006193 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.43 % |
Parental protein coverage: | 98.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LWAALPSPTLLRADPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTK-STGGAPTF |
.WAA.P..T.....PA.VGVL.GKD.SSF..NGLTLGGQKCSVI.D.LLQDG.FTMDL.TK...G..PTF | |
Retrocopy | VWAAVPGKTFVNITPAWVGVLAGKDWSSFLMNGLTLGGQKCSVIWDLLLQDGVFTMDLHTK>TSG-TPTF |
Parental | NITVTMTAKTLVLLMGKEG-VHGGMINKKCYEMASHLRRSQY |
.ITVTMTAK.LVLL.GKEG..HG.MINKKCYEM.SHL..SQY | |
Retrocopy | SITVTMTAKMLVLLLGKEG<FHGSMINKKCYEMSSHLWHSQY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |