RetrogeneDB ID: | retro_ogar_2143 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873596.1:6944944..6945280(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFN1 | ||
Ensembl ID: | ENSOGAG00000031395 | ||
Aliases: | None | ||
Description: | profilin 1 [Source:HGNC Symbol;Acc:8881] |
Percent Identity: | 84.82 % |
Parental protein coverage: | 80. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PSVWAAVPGKTFVNITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPT |
PSVWA.VPGKTF.NIT..EVGVLVGKD.S.FFVNGL..GGQKCSVI..SLLQDGEFTM.L.TKST.GAPT | |
Retrocopy | PSVWATVPGKTFLNITATEVGVLVGKDGSRFFVNGLIIGGQKCSVIWNSLLQDGEFTMNLHTKSTRGAPT |
Parental | FNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY |
FNVTVTMTAKTL.LLMGKEG..GGLINKKCYEMASHL.RSQY | |
Retrocopy | FNVTVTMTAKTLGLLMGKEGAYGGLINKKCYEMASHLGRSQY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |