RetrogeneDB ID: | retro_amel_322 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192385.1:1810828..1811286(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSAMEG00000012402 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 73.25 % |
Parental protein coverage: | 97.5 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LLPNMAQSVNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKV-VQTKYVEAKDCLNVLNKNNEGKELLVP |
LLPNM.QSVNITELNLPQ.E.LK..L.Q.VE.LSTS.AQ.K...QTK.VE..D.LNVL.....GKELL.P | |
Retrocopy | LLPNMEQSVNITELNLPQPETLKS*LNQKVELLSTSTAQVKG<AQTKCVETRDHLNVLKI--KGKELLIP |
Parental | LTSSMYVPGKLHGVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMM |
LTSSMY.PGKLH.VEHVLI.VG.GYYVEKT.EDAKDFF.RK.DF.T.QM.KI.P.LQ.K.AM.Q.V.E.M | |
Retrocopy | LTSSMYLPGKLHDVEHVLIVVGIGYYVEKTTEDAKDFFERKTDF-TEQMQKI*PSLQAKQAMRQGVTEIM |
Parental | SQKIQQLTALGATQATA |
SQKIQQLTA.GATQATA | |
Retrocopy | SQKIQQLTAVGATQATA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |