RetrogeneDB ID: | retro_etel_372 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6268:117903..118260(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSETEG00000002111 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 89.92 % |
Parental protein coverage: | 92.25 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAQSVNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNRTNEGKELLVPLTSSM |
MAQSVNITELNL.QLEMLKNQLDQ.VEFLSTS.AQLKVVQTKYVEAKDC.NVL..TNEGKELLVPLTSS. | |
Retrocopy | MAQSVNITELNLLQLEMLKNQLDQDVEFLSTSLAQLKVVQTKYVEAKDCPNVLDPTNEGKELLVPLTSSV |
Parental | YVPGKLHDVDHVLIDVGTGYYVEKTAENAKDFFKRKIDFLTKQMEKIQP |
.VPGKL.D.DHVLI.VGTGYYVEKTAE.AKDFFKRKIDFLTKQMEKIQP | |
Retrocopy | CVPGKLRD*DHVLIEVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |