Parental gene: | PFDN5, ENSFCAG00000005871 |
| Aliases: | None |
| Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
| Organism: | Cat (Felis catus) |
| Coordinates: | B4:82129231..82131825(+) |
>ENSFCAG00000005871
TTAGTCCTCCTTCCCAACATGGCGCAGTCAGTTAACATCACCGAGCTGAACCTACCACAGCTAGAGATGCTCAAGAACCA
GCTGGACCAGGAAGTGGAGTTCTTGTCCACGTCCATTGCCCAGCTCAAGGTGGTACAGACCAAGTATGTGGAAGCCAAGG
ACTGTCTGAACGTGCTGAACAAGAACAACGAGGGGAAAGAATTACTCGTCCCACTGACGAGTTCTATGTATGTCCCGGGG
AAGCTACATGATGTGGAACATGTCCTCATCGATGTGGGAACAGGCTACTATGTAGAAAAGACAGCTGAGGATGCCAAGGA
CTTTTTCAAGAGGAAGATAGACTTCCTCACCAAGCAAATGGAGAAAATCCAGCCAGCTCTGCAGGAGAAGCATGCCATGA
AACAGGCTGTCATGGAGATGATGAGCCAGAAGATTCAGCAGCTCACAGCCCTCGGGGCAACTCAGGCTACTGCCAAGGCC
TGA
TTAGTCCTCCTTCCCAACATGGCGCAGTCAGTTAACATCACCGAGCTGAACCTACCACAGCTAGAGATGCTCAAGAACCA
GCTGGACCAGGAAGTGGAGTTCTTGTCCACGTCCATTGCCCAGCTCAAGGTGGTACAGACCAAGTATGTGGAAGCCAAGG
ACTGTCTGAACGTGCTGAACAAGAACAACGAGGGGAAAGAATTACTCGTCCCACTGACGAGTTCTATGTATGTCCCGGGG
AAGCTACATGATGTGGAACATGTCCTCATCGATGTGGGAACAGGCTACTATGTAGAAAAGACAGCTGAGGATGCCAAGGA
CTTTTTCAAGAGGAAGATAGACTTCCTCACCAAGCAAATGGAGAAAATCCAGCCAGCTCTGCAGGAGAAGCATGCCATGA
AACAGGCTGTCATGGAGATGATGAGCCAGAAGATTCAGCAGCTCACAGCCCTCGGGGCAACTCAGGCTACTGCCAAGGCC
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 32 .05 RPM |
| SRP017611_kidney | 102 .44 RPM |
| SRP017611_brain | 23 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012402 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000007016 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018477 | ortholog_one2many | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013002 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002111 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000123349 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026308 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012110 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022030 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000006059 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000001289 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017706 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009463 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000015638 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000012413 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004575 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005010 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000006221 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016436 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_828 | 76.42 | 65.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1215 | 85.00 | 75.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1468 | 63.53 | 52.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_1566 | 88.04 | 56.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000005871 retrocopies