RetrogeneDB ID: | retro_etel_950 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_190218:805..1067(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSETEG00000002111 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 63.64 % |
Parental protein coverage: | 66.67 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VEAKDCLNVLNRTNEGKELLVPL-TSSMYVPGKLHDVDHVLIDVGTGYYVEKTAENAKDFFKRKIDFLTK |
.EA..CL.V.N....GKE.LVPL.TS...VPGK..DV.HVLI.VGTGY..EKTA..AK.F.KR.IDF.TK | |
Retrocopy | MEARGCLDVPNKGSRGKEPLVPL>TSAL*VPGKPQDVEHVLINVGTGY*AEKTAKDAKVFLKRQIDFHTK |
Parental | QMEKIQPAL-QEKHAVKQ |
QM...QPAL..EKHA.KQ | |
Retrocopy | QMGRLQPALWLEKHAMKQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |