RetrogeneDB ID: | retro_chof_1571 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_328003:1009..1171(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SVIP | ||
Ensembl ID: | ENSCHOG00000013152 | ||
Aliases: | None | ||
Description: | small VCP/p97-interacting protein [Source:HGNC Symbol;Acc:25238] |
Percent Identity: | 70.37 % |
Parental protein coverage: | 70.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MGLCFPCPGEAEPPSPDPEEKRAKLAEAAERRQREAASRGILDVQSVEEKRKKK |
M.L.FPCP.E..PP..DPEEKR...AEAA.RRQR.AAS.GILD.Q.VEEKRK.K | |
Retrocopy | MSL*FPCPMEDKPPLLDPEEKRT*FAEAADRRQRKAASQGILDIQTVEEKRKQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000013152 | 4 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000016735 | 4 retrocopies | |
Sus scrofa | ENSSSCG00000022838 | 1 retrocopy |