Parental gene: | SVIP, ENSSSCG00000022838 |
| Aliases: | None |
| Description: | small VCP/p97-interacting protein [Source:HGNC Symbol;Acc:25238] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 2:39939039..39942228(-) |
>ENSSSCG00000022838
ATGGGGCTGTGTTTTCCCTGTCCAACGGAGGAGGCGCCTCCCTCGCCAGACCCGGAAGAAAAAAGAGCAAAGCTTGCAGA
GGCTGCAGAGAGAAGACAGAAGGAGGCTGCATCTCGGGGCATTTTGGATGTTAGGTCTGTGGAAGAAAAAAGAAAGAAAA
AGGAAAAAATAGAAAAACAAATGGCTACATCTGGACCCCCACCAGAAGGTGGACTTAGAGTAAGTATTAAA
ATGGGGCTGTGTTTTCCCTGTCCAACGGAGGAGGCGCCTCCCTCGCCAGACCCGGAAGAAAAAAGAGCAAAGCTTGCAGA
GGCTGCAGAGAGAAGACAGAAGGAGGCTGCATCTCGGGGCATTTTGGATGTTAGGTCTGTGGAAGAAAAAAGAAAGAAAA
AGGAAAAAATAGAAAAACAAATGGCTACATCTGGACCCCCACCAGAAGGTGGACTTAGAGTAAGTATTAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .27 RPM |
| SRP014902_testis | 0 .71 RPM |
| SRP018856_adipose | 0 .80 RPM |
| SRP018288_kidney | 5 .32 RPM |
| SRP018288_lung | 2 .44 RPM |
| SRP018288_liver | 1 .76 RPM |
| SRP018288_heart | 2 .54 RPM |
| SRP035408_liver | 2 .67 RPM |
| SRP035408_brain | 13 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013152 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000016735 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_446 | 70.18 | 72.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000022838 retrocopies