Parental gene: | SVIP, ENSDNOG00000016735 |
| Aliases: | None |
| Description: | small VCP/p97-interacting protein [Source:HGNC Symbol;Acc:25238] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_34697:1264..7863(-) |
>ENSDNOG00000016735
ATGGGGCTGTGTTTTCCTTGCCCCGGGGAGGCTGAGCCTCCCTCGCCGGACCCGGAAGAGAAAAGAGCAAAACTTGCAGA
AGCTGCAGAGAGAAGACAGAGGGAGGCTGCATCTCGGGGCATTTTGAATGTTCAATCTGTGGAAGAAAAGAGAAAGAAAA
AGGAAAGATTAGAAAAACAAATCACTACAACTGGACCCCCACCAGAAGGTGGACTTAGAACAGTTTCATAA
ATGGGGCTGTGTTTTCCTTGCCCCGGGGAGGCTGAGCCTCCCTCGCCGGACCCGGAAGAGAAAAGAGCAAAACTTGCAGA
AGCTGCAGAGAGAAGACAGAGGGAGGCTGCATCTCGGGGCATTTTGAATGTTCAATCTGTGGAAGAAAAGAGAAAGAAAA
AGGAAAGATTAGAAAAACAAATCACTACAACTGGACCCCCACCAGAAGGTGGACTTAGAACAGTTTCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .53 RPM |
| SRP012922_cerebellum | 9 .62 RPM |
| SRP012922_heart | 6 .03 RPM |
| SRP012922_kidney | 5 .75 RPM |
| SRP012922_liver | 2 .63 RPM |
| SRP012922_lung | 7 .64 RPM |
| SRP012922_quadricep_muscle | 9 .87 RPM |
| SRP012922_spleen | 7 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013152 | ortholog_one2one | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000022838 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_928 | 73.97 | 96.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_945 | 72.60 | 96.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2035 | 75.00 | 94.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2072 | 73.58 | 68.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000016735 retrocopies