RetrogeneDB ID: | retro_chof_1699 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_36144:1906..2274(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TOMM20 | ||
Ensembl ID: | ENSCHOG00000002383 | ||
Aliases: | None | ||
Description: | translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] |
Percent Identity: | 76.19 % |
Parental protein coverage: | 86.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLREXXXXXXXXXXXXXXXXLPDLKDPEAVQKFFLE |
GRNSAIA.GV.GALFIGYCIYFD.KRRSDPNFKN.LR..................PDLKD.EAVQKFFLE | |
Retrocopy | GRNSAIATGVYGALFIGYCIYFDHKRRSDPNFKNKLRQQRKKQKLAQERAGLSKSPDLKDAEAVQKFFLE |
Parental | E-IQLGEELLAQGEFEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP |
E.IQLGEELLAQG..EKGVDHLTNA.AVCG.PQ.LLQVLQQ.LPPPVFQMLLTKLP | |
Retrocopy | E<IQLGEELLAQG--EKGVDHLTNAVAVCGRPQRLLQVLQQPLPPPVFQMLLTKLP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |