RetrogeneDB ID: | retro_etel_1224 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_231373:3644..3889(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TOMM20 | ||
Ensembl ID: | ENSETEG00000017693 | ||
Aliases: | None | ||
Description: | translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] |
Percent Identity: | 69.41 % |
Parental protein coverage: | 55.48 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | EAVQ-KFFLEEIQLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQ-VLQQTLPPPVFQMLLTKLPTIS |
EAVQ.KFFLEEI..GEELL.A.G..EKGV..LT.AIAVCG...Q....V.Q..LPPP..QMLL.KLPTIS | |
Retrocopy | EAVQ>KFFLEEIHRGEELL>ALGE*EKGVGRLTSAIAVCG*QPQQSS>V*QPSLPPPFSQMLLSKLPTIS |
Parental | QRIVSAQS-LAEDDV |
QRIVS.QS.LAED.V | |
Retrocopy | QRIVSVQS<LAEDGV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |