RetrogeneDB ID: | retro_etel_130 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2404:195180..195598(-) | ||
Located in intron of: | ENSETEG00000003600 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TOMM20 | ||
Ensembl ID: | ENSETEG00000017693 | ||
Aliases: | None | ||
Description: | translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] |
Percent Identity: | 78.08 % |
Parental protein coverage: | 98.63 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MVGRNSAIAAGVCGALFIGYCIYF-DRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKF |
MVG.NSAI.A....ALFIGYC....DRKR..DP.FKNRLRERRKKQKL.KERAGL.K.PDLKDAEAVQKF | |
Retrocopy | MVGQNSAITA----ALFIGYCTPW<DRKRWPDPKFKNRLRERRKKQKLVKERAGLPKFPDLKDAEAVQKF |
Parental | FLEEIQLGEELLAQGDYEK-GVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTISQRIVSAQS |
FLEEI.LGEE.LAQG..EK.GVDHLTN.I.VCG.PQQ.LQV.QQT.PPPVF..LLTKLP...QRIVSAQS | |
Retrocopy | FLEEIRLGEE*LAQGE*EK<GVDHLTNTITVCGRPQQFLQV*QQTVPPPVFLVLLTKLPNKRQRIVSAQS |
Parental | LAEDDV |
LAEDDV | |
Retrocopy | LAEDDV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |