RetrogeneDB ID: | retro_chof_2652 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_94333:94..330(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSCHOG00000009158 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 83.75 % |
Parental protein coverage: | 85.87 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIML-KGD |
MVQPINL.FRYL.NRS.IQVWLY.QVNM.IEGC.IGFDEY..L.LDDAEEIHSKTKSRK.LG.IML.KGD | |
Retrocopy | MVQPINLFFRYL*NRSQIQVWLYKQVNMGIEGCTIGFDEYLDLILDDAEEIHSKTKSRK*LGQIML<KGD |
Parental | NITLLQSVSN |
NITLLQS.SN | |
Retrocopy | NITLLQSISN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |