RetrogeneDB ID: | retro_etel_1477 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_272341:14351..14726(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000000961 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TOMM22 | ||
Ensembl ID: | ENSETEG00000000544 | ||
Aliases: | None | ||
Description: | translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:HGNC Symbol;Acc:18002] |
Percent Identity: | 78.91 % |
Parental protein coverage: | 87.32 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | AAAAAAAGPGAPASPDELLPKGDAEKTEE-ELEEDDD--EEPDETLSERLWGLTEMFPERVRSAAGATFD |
AAAAAA..PGAP.S.DELLPKG.....E....E...D..EEPDETLSERLWGLTEMFPERVRS.AG.TFD | |
Retrocopy | AAAAAATCPGAPVSRDELLPKGERRRGED<QEELEEDDDEEPDETLSERLWGLTEMFPERVRSVAGTTFD |
Parental | LSFFVAHKMYR-FSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT |
LSF.VAHKMYR.FSRAA.WIGTTSF.I.VLP.VFETEKLQMEQQQQLQQRQILLG.NT | |
Retrocopy | LSFSVAHKMYR>FSRAA-WIGTTSFTIPVLPAVFETEKLQMEQQQQLQQRQILLGRNT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |