RetrogeneDB ID: | retro_etel_266 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4521:248942..249205(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSETEG00000003217 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 75.82 % |
Parental protein coverage: | 54.66 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | FKALK-IPVPEDKFTALVDAEEK-EDVKTCAEFVSLSKTRIEEYEKQVVRMRNIIPFDQMTLDDLNEVFP |
FKALK.IPVPEDKFTAL..AEEK.EDVKTC..FVSLS.TRIEEY..Q....RN.IPF.QMT.D.LN.VF. | |
Retrocopy | FKALK<IPVPEDKFTALGAAEEK<EDVKTCPAFVSLSNTRIEEYQRQLGKRRNTIPFEQMTTDNLNKVFS |
Parental | ETKLDKTK-YPYWPHRPIESL |
ETKLDKTK..PYWPHRP.ESL | |
Retrocopy | ETKLDKTK>DPYWPHRPVESL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |