RetrogeneDB ID: | retro_sara_434 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_205994:2012..2244(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSSARG00000013370 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 77.5 % |
Parental protein coverage: | 88.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | DKFTAQVDAEEKEDVKSCNEFLAMSKARIEEYQRELEKMKNII-PFEQ-MTIEDLNEAFPETKLDMKKYP |
DKFTA.V..EEKEDV..CNE.L..SKARIE.YQ..LEKMK..I.PFEQ.MTIEDLNEAF.ETKLD.KKYP | |
Retrocopy | DKFTARVNTEEKEDVQNCNESLVLSKARIEKYQKKLEKMKKTI<PFEQ<MTIEDLNEAFLETKLDRKKYP |
Parental | YWPHKPIESL |
YWPH.PIESL | |
Retrocopy | YWPHNPIESL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |